The gene/protein map for NC_012779 is currently unavailable.
Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53717817

Identifier: 53717817

GI number: 53717817

Start: 178862

End: 179185

Strand: Reverse

Name: 53717817

Synonym: BPSL0175

Alternate gene names: NA

Gene position: 179185-178862 (Counterclockwise)

Preceding gene: 53717818

Following gene: 53717816

Centisome position: 4.4

GC content: 56.79

Gene sequence:

>324_bases
TTGTCCCTTATGGGTTACAATTCTCGCATGTTCAAAGTTCTGACGACCCCCCAGTTTGACAAATGGCTTGACGGGCTTCG
CGATCCGGTCGGTAGCGCGGCAATCAACCTGCGCATCGAGCGGGCGAAGCTTGGCAATCTCGGCCAGTGGCGCGCAGTCG
GCGACGGCGTCAACGAAATGAAGATTGATGTGGGGCCGGGATATCGGGCCTATTTCGTGCGGCGCGGAAAAATTATCGTC
GTGGTGTTGTGCGGCGGGGACAAGTCGACGCAGAAGAAGGACATCAAGCTAGCGAAGCAAATCGCTGGCGAACTGGAGGA
TTGA

Upstream 100 bases:

>100_bases
GCCGCGCCCGGTTGCCCGGTGCGCGGCCCTTCGCGTGGCGAATGCGCTTCGTTACACTGGCTTGTGCGACTTGAGCCACT
CCTTCACAGCTGTAGCCGAA

Downstream 100 bases:

>100_bases
GTATGAAAATCAGCGAACTGGCCGAGTTCGACGGCTCGAAGTACCTGAAGGACGAGGAAACGATTCGTCACTACCTGGCG
CAAGCGTTCGAGGATGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MSLMGYNSRMFKVLTTPQFDKWLDGLRDPVGSAAINLRIERAKLGNLGQWRAVGDGVNEMKIDVGPGYRAYFVRRGKIIV
VVLCGGDKSTQKKDIKLAKQIAGELED

Sequences:

>Translated_107_residues
MSLMGYNSRMFKVLTTPQFDKWLDGLRDPVGSAAINLRIERAKLGNLGQWRAVGDGVNEMKIDVGPGYRAYFVRRGKIIV
VVLCGGDKSTQKKDIKLAKQIAGELED
>Mature_106_residues
SLMGYNSRMFKVLTTPQFDKWLDGLRDPVGSAAINLRIERAKLGNLGQWRAVGDGVNEMKIDVGPGYRAYFVRRGKIIVV
VLCGGDKSTQKKDIKLAKQIAGELED

Specific function: Unknown

COG id: COG3657

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014056
- InterPro:   IPR009241 [H]

Pfam domain/function: PF05973 Gp49 [H]

EC number: NA

Molecular weight: Translated: 11885; Mature: 11754

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMGYNSRMFKVLTTPQFDKWLDGLRDPVGSAAINLRIERAKLGNLGQWRAVGDGVNEM
CCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEECCCCCCEE
KIDVGPGYRAYFVRRGKIIVVVLCGGDKSTQKKDIKLAKQIAGELED
EEEECCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLMGYNSRMFKVLTTPQFDKWLDGLRDPVGSAAINLRIERAKLGNLGQWRAVGDGVNEM
CCCCCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEECCCCCCEE
KIDVGPGYRAYFVRRGKIIVVVLCGGDKSTQKKDIKLAKQIAGELED
EEEECCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]