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The map label for this gene is 53717816

Identifier: 53717816

GI number: 53717816

Start: 178503

End: 178859

Strand: Reverse

Name: 53717816

Synonym: BPSL0174

Alternate gene names: NA

Gene position: 178859-178503 (Counterclockwise)

Preceding gene: 53717817

Following gene: 53717813

Centisome position: 4.39

GC content: 64.99

Gene sequence:

>357_bases
ATGAAAATCAGCGAACTGGCCGAGTTCGACGGCTCGAAGTACCTGAAGGACGAGGAAACGATTCGTCACTACCTGGCGCA
AGCGTTCGAGGATGGAAACCCGCGGCTGATTCAAGCCGCGCTCGGGAACGTCGCGAAAGCGCGCGGCATGACAGCGCTCG
CGCGCGAGTCCGGCGTGAAGCGTGAAGCGCTCTATCGCGCGCTGTCGGAAGGTGGGAACGCGGAATTCGCAACGATCATG
AAAGTCGTGGGCGCGTTGGGGCTGCACCTGACCGTTGCGCCGGCCGAACCTGCGCCGGTGCCCGCGCCGGCAACAACGCG
TGCACGCTCGCGCGTTCGCACGGCTGCGCACGCGTAA

Upstream 100 bases:

>100_bases
GAAAAATTATCGTCGTGGTGTTGTGCGGCGGGGACAAGTCGACGCAGAAGAAGGACATCAAGCTAGCGAAGCAAATCGCT
GGCGAACTGGAGGATTGAGT

Downstream 100 bases:

>100_bases
CGCCATCGACGGCCGGATGCGCGGCGTTGCACTGGTCTGCGCGCTACGCCGCAACCGGCGCCGGCGGAATCTCGTAATCG
TCGAACGTCACAACCTCGTC

Product: putative phage DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKISELAEFDGSKYLKDEETIRHYLAQAFEDGNPRLIQAALGNVAKARGMTALARESGVKREALYRALSEGGNAEFATIM
KVVGALGLHLTVAPAEPAPVPAPATTRARSRVRTAAHA

Sequences:

>Translated_118_residues
MKISELAEFDGSKYLKDEETIRHYLAQAFEDGNPRLIQAALGNVAKARGMTALARESGVKREALYRALSEGGNAEFATIM
KVVGALGLHLTVAPAEPAPVPAPATTRARSRVRTAAHA
>Mature_118_residues
MKISELAEFDGSKYLKDEETIRHYLAQAFEDGNPRLIQAALGNVAKARGMTALARESGVKREALYRALSEGGNAEFATIM
KVVGALGLHLTVAPAEPAPVPAPATTRARSRVRTAAHA

Specific function: Unknown

COG id: COG3636

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014057
- InterPro:   IPR001387 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 12586; Mature: 12586

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISELAEFDGSKYLKDEETIRHYLAQAFEDGNPRLIQAALGNVAKARGMTALARESGVK
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCH
REALYRALSEGGNAEFATIMKVVGALGLHLTVAPAEPAPVPAPATTRARSRVRTAAHA
HHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISELAEFDGSKYLKDEETIRHYLAQAFEDGNPRLIQAALGNVAKARGMTALARESGVK
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCH
REALYRALSEGGNAEFATIMKVVGALGLHLTVAPAEPAPVPAPATTRARSRVRTAAHA
HHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]