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The map label for this gene is ydaN [H]

Identifier: 52787913

GI number: 52787913

Start: 4071998

End: 4074124

Strand: Direct

Name: ydaN [H]

Synonym: BLi04236

Alternate gene names: 52787913

Gene position: 4071998-4074124 (Clockwise)

Preceding gene: 52787912

Following gene: 52787929

Centisome position: 96.43

GC content: 48.47

Gene sequence:

>2127_bases
TTGAAATATATCATCATATGTCTGGCAAGCTTCTTGCTGATCACGGCGACGGGACAAGCGGCTGCAGCCAAAGACGTTAC
AGTAGACGGCTCGATCCTGGGGGAAAACAGCCGGGAACAAGCCAAGCAGCAAGTGCTCACAAACGATCTCTTGACTTTAT
ACGGGGCAAAAGACAGCGCCGAGCTGACGTATCAAATACCGGCGGGCGCCTCCTCTACCCATCAGCAGCTTACACTTAAA
TACGAGGCCTCAGACCTTTTAATCTCACCGTCTTCTTTAACAGCCGAGATTGATGGCGAACCGGTCAAAACGGTTAAGCT
TGAAGGGAATAACGGGAAGAAAACGCTGAAGCTCTCGCTGAACAAAAGCCAGTCGTCTCCAGGGTTTCACAGCTTATCAC
TGAAGTTCTACGGAGTGGTTCATGAAGGCGTCTGCGTCAGACAGGACTCCTCCGGGAACTGGATCAAAATTTATCCGGAC
AGTCGTCTGAATATCGGGGAAAAGAACGAATCTAAAGGAGCGGCGCTCGAACATTATCCTTATCCGTTCGCCCAGTCCGG
CAGCTCCGTGGAAAAAACGGCAATCGTCATTCCGGACCATCCAAGTTCGGCTGAAATCGAAGCGGCAGTTAAAACAGAAG
CATACCTCAAAACGGTTGACAACAGCATCAGCACGAAGATCTTGGGTGAATCTGACCTGGCGAAGATCGACAGGCCGACG
ATTGTGATCGGCGTTCACCATCACTGGAGCGGCAAAGTGAAAAAGCTGTTGAAACAAGCGAAACTCGAAGCAAAAGAAGA
CAAGCTTTTGCTTGCGAAACGGATGCTCAAAGCAAAGGATAAGCAGCAGCCTGTATTGTTTGCGGCCGCAGCATCTGATG
ATGTGCTTTCTGAAAAAATCAGCGTCATCACCGACAAAACGTATGCCGCCCAGCTCAGCGGCGACACGCTGGCAATCGGC
AAACTTCAGCAGCATAGCAAACGGGGCGGCAGCAAGCTGACACTTGAGGATTTCGGGGCGGGGGATTTGACAATCGGTTC
GGGACAGACATCTTCCGAGCATTTTTATTATCCCGCGCCAGCTCTATTAGACAAGAATCAGCCTGCAAAGCTTTCGCTTG
CGATGAAAAAATCGAAAACGATTCAAAAGCAGGCCGGCCAAAGCGACTTAGCTGCGGAACAGGCGGAGCTGAAGGTCATG
ATCAATGGCCAGCCTCATTCCGTCGGACTTGACGATATAGGAAAAGAAGACAAAAACGGCTTTTACCATGTTTCTTTAAA
AGTCGATCCGAAACTTTTGCAAAAAAGCCGTTACATTGATATTCAATTTGCCGCTTCAGGCTTGAAAGAGAACAACCCTT
GCTACGCGGTGAACGAGGACAAATGGATTTTTATCGATAAACAAAGTGCATTGTCTTACCATGTCAGCGACACGTCAGCT
TCAGCAGATTTTCAAGCGTGGCCGCTTCCCTACGCGGGTGATCATAACAATAAAACGCTGATGATCCTGCCCGACAATGC
GGATCAGTCGAAGATTGATGAGCTTTCGCTTGTAGTCGGCTCCTTCGGCAGCGAAGCCCGGCAGGCATTCACAGTAAAAA
CATCCTCGGAAGTCAAACCGGATGACGTGAAAGGAAGAAACGTAATCTTCATCGGAAGCGTCGATCAATTCTCTCTGCTG
AAGGAAAAAACAGCCGAATTGGCTGTTCCGACGGCGAAAAACGGAACATTTGATGTGTCATCTTTTCAAATGCTGAATGA
AACGACAAAACAAGTCGCGTTTACTCAAACGTCGCTGTGGGATTCAAATTACTCGATGGCTGTTTTCGCGCCGTTTAAAG
GGCAAGGCACAGCAGTCACAAAAGAAATGATCAACTTTTTGAACAGCAATGATTTCGCAGCAACCGTTGTGAATGAAACG
GACAGCCATCAGCTATTTACAAACCATCAACAGCTGACAGCAAAATCCGCCGAAACCAAGACGGATGATAAACAGGAAAG
CAATCAGCAGCATGTGCTGTACATTGCCATCCTGATCGTAATCATAGCGGCAGCGGTTATTTTGATCTTGACAACGGCAA
GGCGCAGAAAAAGAAAGGCCAATGCCGGCGGAGGGATTGACGAATAA

Upstream 100 bases:

>100_bases
CTCGTGATTTATTCTTTATTCGTAGAAATCAAGCACCGCCTGTTCAAGCAACATGGTACAAAACAGAACGATACAATCAA
AAGAAAAGCGGGTGACTTTT

Downstream 100 bases:

>100_bases
AACAGGGGCTTGCTTTTAGCCCCTGTTTTTTTATAAGTATTCAACCTGTTTCTCATATACACCCTTCGCAATTTTAGCTA
AAACATCGATTCCCCTTATA

Product: YdaN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 708; Mature: 708

Protein sequence:

>708_residues
MKYIIICLASFLLITATGQAAAAKDVTVDGSILGENSREQAKQQVLTNDLLTLYGAKDSAELTYQIPAGASSTHQQLTLK
YEASDLLISPSSLTAEIDGEPVKTVKLEGNNGKKTLKLSLNKSQSSPGFHSLSLKFYGVVHEGVCVRQDSSGNWIKIYPD
SRLNIGEKNESKGAALEHYPYPFAQSGSSVEKTAIVIPDHPSSAEIEAAVKTEAYLKTVDNSISTKILGESDLAKIDRPT
IVIGVHHHWSGKVKKLLKQAKLEAKEDKLLLAKRMLKAKDKQQPVLFAAAASDDVLSEKISVITDKTYAAQLSGDTLAIG
KLQQHSKRGGSKLTLEDFGAGDLTIGSGQTSSEHFYYPAPALLDKNQPAKLSLAMKKSKTIQKQAGQSDLAAEQAELKVM
INGQPHSVGLDDIGKEDKNGFYHVSLKVDPKLLQKSRYIDIQFAASGLKENNPCYAVNEDKWIFIDKQSALSYHVSDTSA
SADFQAWPLPYAGDHNNKTLMILPDNADQSKIDELSLVVGSFGSEARQAFTVKTSSEVKPDDVKGRNVIFIGSVDQFSLL
KEKTAELAVPTAKNGTFDVSSFQMLNETTKQVAFTQTSLWDSNYSMAVFAPFKGQGTAVTKEMINFLNSNDFAATVVNET
DSHQLFTNHQQLTAKSAETKTDDKQESNQQHVLYIAILIVIIAAAVILILTTARRRKRKANAGGGIDE

Sequences:

>Translated_708_residues
MKYIIICLASFLLITATGQAAAAKDVTVDGSILGENSREQAKQQVLTNDLLTLYGAKDSAELTYQIPAGASSTHQQLTLK
YEASDLLISPSSLTAEIDGEPVKTVKLEGNNGKKTLKLSLNKSQSSPGFHSLSLKFYGVVHEGVCVRQDSSGNWIKIYPD
SRLNIGEKNESKGAALEHYPYPFAQSGSSVEKTAIVIPDHPSSAEIEAAVKTEAYLKTVDNSISTKILGESDLAKIDRPT
IVIGVHHHWSGKVKKLLKQAKLEAKEDKLLLAKRMLKAKDKQQPVLFAAAASDDVLSEKISVITDKTYAAQLSGDTLAIG
KLQQHSKRGGSKLTLEDFGAGDLTIGSGQTSSEHFYYPAPALLDKNQPAKLSLAMKKSKTIQKQAGQSDLAAEQAELKVM
INGQPHSVGLDDIGKEDKNGFYHVSLKVDPKLLQKSRYIDIQFAASGLKENNPCYAVNEDKWIFIDKQSALSYHVSDTSA
SADFQAWPLPYAGDHNNKTLMILPDNADQSKIDELSLVVGSFGSEARQAFTVKTSSEVKPDDVKGRNVIFIGSVDQFSLL
KEKTAELAVPTAKNGTFDVSSFQMLNETTKQVAFTQTSLWDSNYSMAVFAPFKGQGTAVTKEMINFLNSNDFAATVVNET
DSHQLFTNHQQLTAKSAETKTDDKQESNQQHVLYIAILIVIIAAAVILILTTARRRKRKANAGGGIDE
>Mature_708_residues
MKYIIICLASFLLITATGQAAAAKDVTVDGSILGENSREQAKQQVLTNDLLTLYGAKDSAELTYQIPAGASSTHQQLTLK
YEASDLLISPSSLTAEIDGEPVKTVKLEGNNGKKTLKLSLNKSQSSPGFHSLSLKFYGVVHEGVCVRQDSSGNWIKIYPD
SRLNIGEKNESKGAALEHYPYPFAQSGSSVEKTAIVIPDHPSSAEIEAAVKTEAYLKTVDNSISTKILGESDLAKIDRPT
IVIGVHHHWSGKVKKLLKQAKLEAKEDKLLLAKRMLKAKDKQQPVLFAAAASDDVLSEKISVITDKTYAAQLSGDTLAIG
KLQQHSKRGGSKLTLEDFGAGDLTIGSGQTSSEHFYYPAPALLDKNQPAKLSLAMKKSKTIQKQAGQSDLAAEQAELKVM
INGQPHSVGLDDIGKEDKNGFYHVSLKVDPKLLQKSRYIDIQFAASGLKENNPCYAVNEDKWIFIDKQSALSYHVSDTSA
SADFQAWPLPYAGDHNNKTLMILPDNADQSKIDELSLVVGSFGSEARQAFTVKTSSEVKPDDVKGRNVIFIGSVDQFSLL
KEKTAELAVPTAKNGTFDVSSFQMLNETTKQVAFTQTSLWDSNYSMAVFAPFKGQGTAVTKEMINFLNSNDFAATVVNET
DSHQLFTNHQQLTAKSAETKTDDKQESNQQHVLYIAILIVIIAAAVILILTTARRRKRKANAGGGIDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018513 [H]

Pfam domain/function: PF03170 BcsB [H]

EC number: NA

Molecular weight: Translated: 76988; Mature: 76988

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIIICLASFLLITATGQAAAAKDVTVDGSILGENSREQAKQQVLTNDLLTLYGAKDSA
CCEEHHHHHHHHHEECCCCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHEEEECCCCCC
ELTYQIPAGASSTHQQLTLKYEASDLLISPSSLTAEIDGEPVKTVKLEGNNGKKTLKLSL
EEEEEECCCCCCCCEEEEEEEECCCEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEE
NKSQSSPGFHSLSLKFYGVVHEGVCVRQDSSGNWIKIYPDSRLNIGEKNESKGAALEHYP
CCCCCCCCEEEEEEEEEEEEECCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEECCC
YPFAQSGSSVEKTAIVIPDHPSSAEIEAAVKTEAYLKTVDNSISTKILGESDLAKIDRPT
CCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCEEEECCCHHHHCCCCE
IVIGVHHHWSGKVKKLLKQAKLEAKEDKLLLAKRMLKAKDKQQPVLFAAAASDDVLSEKI
EEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
SVITDKTYAAQLSGDTLAIGKLQQHSKRGGSKLTLEDFGAGDLTIGSGQTSSEHFYYPAP
HEEECCEEEEEECCCEEEECHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCEEEECCH
ALLDKNQPAKLSLAMKKSKTIQKQAGQSDLAAEQAELKVMINGQPHSVGLDDIGKEDKNG
HHCCCCCCCEEEEEEHHHHHHHHHCCCCHHCCCCEEEEEEECCCCCCCCHHHCCCCCCCC
FYHVSLKVDPKLLQKSRYIDIQFAASGLKENNPCYAVNEDKWIFIDKQSALSYHVSDTSA
EEEEEEEECHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEECCCCEEEEECCCCC
SADFQAWPLPYAGDHNNKTLMILPDNADQSKIDELSLVVGSFGSEARQAFTVKTSSEVKP
CCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCC
DDVKGRNVIFIGSVDQFSLLKEKTAELAVPTAKNGTFDVSSFQMLNETTKQVAFTQTSLW
CCCCCCEEEEEECCCHHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHHHHEEEEEHEEC
DSNYSMAVFAPFKGQGTAVTKEMINFLNSNDFAATVVNETDSHQLFTNHQQLTAKSAETK
CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEECCCHHHHHCCCCCC
TDDKQESNQQHVLYIAILIVIIAAAVILILTTARRRKRKANAGGGIDE
CCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKYIIICLASFLLITATGQAAAAKDVTVDGSILGENSREQAKQQVLTNDLLTLYGAKDSA
CCEEHHHHHHHHHEECCCCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHEEEECCCCCC
ELTYQIPAGASSTHQQLTLKYEASDLLISPSSLTAEIDGEPVKTVKLEGNNGKKTLKLSL
EEEEEECCCCCCCCEEEEEEEECCCEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEE
NKSQSSPGFHSLSLKFYGVVHEGVCVRQDSSGNWIKIYPDSRLNIGEKNESKGAALEHYP
CCCCCCCCEEEEEEEEEEEEECCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEECCC
YPFAQSGSSVEKTAIVIPDHPSSAEIEAAVKTEAYLKTVDNSISTKILGESDLAKIDRPT
CCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCEEEECCCHHHHCCCCE
IVIGVHHHWSGKVKKLLKQAKLEAKEDKLLLAKRMLKAKDKQQPVLFAAAASDDVLSEKI
EEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
SVITDKTYAAQLSGDTLAIGKLQQHSKRGGSKLTLEDFGAGDLTIGSGQTSSEHFYYPAP
HEEECCEEEEEECCCEEEECHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCEEEECCH
ALLDKNQPAKLSLAMKKSKTIQKQAGQSDLAAEQAELKVMINGQPHSVGLDDIGKEDKNG
HHCCCCCCCEEEEEEHHHHHHHHHCCCCHHCCCCEEEEEEECCCCCCCCHHHCCCCCCCC
FYHVSLKVDPKLLQKSRYIDIQFAASGLKENNPCYAVNEDKWIFIDKQSALSYHVSDTSA
EEEEEEEECHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCEEEEECCCCEEEEECCCCC
SADFQAWPLPYAGDHNNKTLMILPDNADQSKIDELSLVVGSFGSEARQAFTVKTSSEVKP
CCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCC
DDVKGRNVIFIGSVDQFSLLKEKTAELAVPTAKNGTFDVSSFQMLNETTKQVAFTQTSLW
CCCCCCEEEEEECCCHHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHHHHEEEEEHEEC
DSNYSMAVFAPFKGQGTAVTKEMINFLNSNDFAATVVNETDSHQLFTNHQQLTAKSAETK
CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEECCCHHHHHCCCCCC
TDDKQESNQQHVLYIAILIVIIAAAVILILTTARRRKRKANAGGGIDE
CCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]