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The map label for this gene is ydaM [H]

Identifier: 52787912

GI number: 52787912

Start: 4070737

End: 4072236

Strand: Direct

Name: ydaM [H]

Synonym: BLi04235

Alternate gene names: 52787912

Gene position: 4070737-4072236 (Clockwise)

Preceding gene: 52787911

Following gene: 52787913

Centisome position: 96.4

GC content: 46.6

Gene sequence:

>1500_bases
GTGGGTAATGTTCTGTTCCTAGTCTCGTTAAGCTTAATATGGGTCATGCTTCTGTATCACATGTTTTTGATGCAGGGCGG
ATTCCGCCACTATATGACCTTCGAACGGAACATTCCGAAGTGGAAAGAGAACGTGAAGGATCTCCCGAAGGTCAGCGTTC
TGATTCCGGCGCATAACGAAGAGGTCGTCATTCGGCAGACGCTGAAGGCGATGGTCAACCTCTATTATCCGAAGGACCGG
CTGGAGATTATTGTCGTCAACGACAATTCATCCGACCGGACGGGTGACATTGTGGATGAATTTTCCACGCAATACGGCTT
TATTAAAATGGTCGTGACCAAACCGCCGCATGCCGGAAAGGGAAAATCGTCGGCGCTCAACTGCGGTTTTGCCGAGTCAA
ACGGGGACGTCATTTGTGTATATGACGCCGACAACACGCCGGAAAAAATGGCTGTTTATTACCTTGTCCTCGGGCTCATG
AATGATCAGAAAGCCGGAGCGGTGGTGGGAAAATTCCGCGTCATCAATGCGGCGAAAACATTGCTCACAAAATTTATTAA
CATCGAAACGATTTGTTTTCAATGGATGGCACAGGGCGGGAGATGGAAATGGTTCAAAATCGCCACGATCCCCGGCACCA
ATTTCGCCATCAGAAGAAGCATTATCGAACAGCTGGGCGGCTGGGATGATAAGGCGCTGGCCGAAGATACCGAGCTTACG
ATCCGGGTCTACAACCTCGGCTACCACATCCGCTTCTTTCCGGCGGCCGTCACTTGGGAACAGGAGCCGGAAACGTGGAA
AGTCTGGTGGCGTCAGCGGACAAGGTGGGCTCGCGGCAACCAGTATGTCGTCCTGAAATTTTTGGCTCAGTTTTTCAAGC
TGAAGAGAAAACGGATTATTTTTGATTTGTTTTATTTCTTTTTTACGTATTTTTTGTTTTTCTTTGGCGTCATCATGTCA
AATGCGATTTTTGTCATCAATTTATTTTATAATCTGCATCTTTCATTCGGTTTTTTGTCTATCATTTTATGGGTTTTGGC
TTTCTTTCTATTTATGACGAAGGTCATGATTACACTGAGCATCGAAAAAACAGAAATGAACAGGCAAAACTTTTTCATCG
TTTTTCTGATGTACTTTACATACTCGCAGGCTTGGATTGTGCTCGTGATTTATTCTTTATTCGTAGAAATCAAGCACCGC
CTGTTCAAGCAACATGGTACAAAACAGAACGATACAATCAAAAGAAAAGCGGGTGACTTTTTTGAAATATATCATCATAT
GTCTGGCAAGCTTCTTGCTGATCACGGCGACGGGACAAGCGGCTGCAGCCAAAGACGTTACAGTAGACGGCTCGATCCTG
GGGGAAAACAGCCGGGAACAAGCCAAGCAGCAAGTGCTCACAAACGATCTCTTGACTTTATACGGGGCAAAAGACAGCGC
CGAGCTGACGTATCAAATACCGGCGGGCGCCTCCTCTACCCATCAGCAGCTTACACTTAA

Upstream 100 bases:

>100_bases
CTCTCTCTTATTGTGCTCTTGTTTGTTGTCATGTTTGTGAGCTATACCCTTTACTTGAGAGCCACATTAAAAAAACGAAT
CTTTAAGGAGAGAAAAAGCC

Downstream 100 bases:

>100_bases
ATACGAGGCCTCAGACCTTTTAATCTCACCGTCTTCTTTAACAGCCGAGATTGATGGCGAACCGGTCAAAACGGTTAAGC
TTGAAGGGAATAACGGGAAG

Product: YdaM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MGNVLFLVSLSLIWVMLLYHMFLMQGGFRHYMTFERNIPKWKENVKDLPKVSVLIPAHNEEVVIRQTLKAMVNLYYPKDR
LEIIVVNDNSSDRTGDIVDEFSTQYGFIKMVVTKPPHAGKGKSSALNCGFAESNGDVICVYDADNTPEKMAVYYLVLGLM
NDQKAGAVVGKFRVINAAKTLLTKFINIETICFQWMAQGGRWKWFKIATIPGTNFAIRRSIIEQLGGWDDKALAEDTELT
IRVYNLGYHIRFFPAAVTWEQEPETWKVWWRQRTRWARGNQYVVLKFLAQFFKLKRKRIIFDLFYFFFTYFLFFFGVIMS
NAIFVINLFYNLHLSFGFLSIILWVLAFFLFMTKVMITLSIEKTEMNRQNFFIVFLMYFTYSQAWIVLVIYSLFVEIKHR
LFKQHGTKQNDTIKRKAGDFFEIYHHMSGKLLADHGDGTSGCSQRRYSRRLDPGGKQPGTSQAASAHKRSLDFIRGKRQR
RADVSNTGGRLLYPSAAYT

Sequences:

>Translated_499_residues
MGNVLFLVSLSLIWVMLLYHMFLMQGGFRHYMTFERNIPKWKENVKDLPKVSVLIPAHNEEVVIRQTLKAMVNLYYPKDR
LEIIVVNDNSSDRTGDIVDEFSTQYGFIKMVVTKPPHAGKGKSSALNCGFAESNGDVICVYDADNTPEKMAVYYLVLGLM
NDQKAGAVVGKFRVINAAKTLLTKFINIETICFQWMAQGGRWKWFKIATIPGTNFAIRRSIIEQLGGWDDKALAEDTELT
IRVYNLGYHIRFFPAAVTWEQEPETWKVWWRQRTRWARGNQYVVLKFLAQFFKLKRKRIIFDLFYFFFTYFLFFFGVIMS
NAIFVINLFYNLHLSFGFLSIILWVLAFFLFMTKVMITLSIEKTEMNRQNFFIVFLMYFTYSQAWIVLVIYSLFVEIKHR
LFKQHGTKQNDTIKRKAGDFFEIYHHMSGKLLADHGDGTSGCSQRRYSRRLDPGGKQPGTSQAASAHKRSLDFIRGKRQR
RADVSNTGGRLLYPSAAYT
>Mature_498_residues
GNVLFLVSLSLIWVMLLYHMFLMQGGFRHYMTFERNIPKWKENVKDLPKVSVLIPAHNEEVVIRQTLKAMVNLYYPKDRL
EIIVVNDNSSDRTGDIVDEFSTQYGFIKMVVTKPPHAGKGKSSALNCGFAESNGDVICVYDADNTPEKMAVYYLVLGLMN
DQKAGAVVGKFRVINAAKTLLTKFINIETICFQWMAQGGRWKWFKIATIPGTNFAIRRSIIEQLGGWDDKALAEDTELTI
RVYNLGYHIRFFPAAVTWEQEPETWKVWWRQRTRWARGNQYVVLKFLAQFFKLKRKRIIFDLFYFFFTYFLFFFGVIMSN
AIFVINLFYNLHLSFGFLSIILWVLAFFLFMTKVMITLSIEKTEMNRQNFFIVFLMYFTYSQAWIVLVIYSLFVEIKHRL
FKQHGTKQNDTIKRKAGDFFEIYHHMSGKLLADHGDGTSGCSQRRYSRRLDPGGKQPGTSQAASAHKRSLDFIRGKRQRR
ADVSNTGGRLLYPSAAYT

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=360, Percent_Identity=26.9444444444444, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI87082284, Length=267, Percent_Identity=22.8464419475655, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 58068; Mature: 57937

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNVLFLVSLSLIWVMLLYHMFLMQGGFRHYMTFERNIPKWKENVKDLPKVSVLIPAHNE
CCCEEHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCHHHHHHHCCCCEEEEEECCCC
EVVIRQTLKAMVNLYYPKDRLEIIVVNDNSSDRTGDIVDEFSTQYGFIKMVVTKPPHAGK
CHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCC
GKSSALNCGFAESNGDVICVYDADNTPEKMAVYYLVLGLMNDQKAGAVVGKFRVINAAKT
CCCCCEECCEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLTKFINIETICFQWMAQGGRWKWFKIATIPGTNFAIRRSIIEQLGGWDDKALAEDTELT
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHCCCCEEE
IRVYNLGYHIRFFPAAVTWEQEPETWKVWWRQRTRWARGNQYVVLKFLAQFFKLKRKRII
EEEEECCEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
FDLFYFFFTYFLFFFGVIMSNAIFVINLFYNLHLSFGFLSIILWVLAFFLFMTKVMITLS
HHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IEKTEMNRQNFFIVFLMYFTYSQAWIVLVIYSLFVEIKHRLFKQHGTKQNDTIKRKAGDF
EEHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHH
FEIYHHMSGKLLADHGDGTSGCSQRRYSRRLDPGGKQPGTSQAASAHKRSLDFIRGKRQR
HHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH
RADVSNTGGRLLYPSAAYT
HCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
GNVLFLVSLSLIWVMLLYHMFLMQGGFRHYMTFERNIPKWKENVKDLPKVSVLIPAHNE
CCEEHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCHHHHHHHCCCCEEEEEECCCC
EVVIRQTLKAMVNLYYPKDRLEIIVVNDNSSDRTGDIVDEFSTQYGFIKMVVTKPPHAGK
CHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCC
GKSSALNCGFAESNGDVICVYDADNTPEKMAVYYLVLGLMNDQKAGAVVGKFRVINAAKT
CCCCCEECCEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LLTKFINIETICFQWMAQGGRWKWFKIATIPGTNFAIRRSIIEQLGGWDDKALAEDTELT
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHCCCCEEE
IRVYNLGYHIRFFPAAVTWEQEPETWKVWWRQRTRWARGNQYVVLKFLAQFFKLKRKRII
EEEEECCEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
FDLFYFFFTYFLFFFGVIMSNAIFVINLFYNLHLSFGFLSIILWVLAFFLFMTKVMITLS
HHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IEKTEMNRQNFFIVFLMYFTYSQAWIVLVIYSLFVEIKHRLFKQHGTKQNDTIKRKAGDF
EEHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHH
FEIYHHMSGKLLADHGDGTSGCSQRRYSRRLDPGGKQPGTSQAASAHKRSLDFIRGKRQR
HHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH
RADVSNTGGRLLYPSAAYT
HCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]