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The map label for this gene is ydaJ [H]

Identifier: 52787909

GI number: 52787909

Start: 4067098

End: 4068192

Strand: Direct

Name: ydaJ [H]

Synonym: BLi04232

Alternate gene names: 52787909

Gene position: 4067098-4068192 (Clockwise)

Preceding gene: 52787886

Following gene: 52787910

Centisome position: 96.32

GC content: 45.11

Gene sequence:

>1095_bases
GTGAAAGCACCCGTGAGGTATATATGGATTGGTATGATCCTGTGCTTTTTATCCGTCAGTCTGGCCGTCGGCTGCATCAA
AGCTGAAGATCAGTCAGATGATGAGAAAAATGATGAAGCGCTTCAGCCTGCCGAACACTTCGTTTACCGTCATTTAATGA
GCGATCAGGGGCTGATCAAAACCGGCTTTTCCGACCAGCCTGTTTACTTGTCGGAATCGCTTGGCTTGTGGATGGAGTTT
TTGATCAGCAAAAAAGACGGCGAGCATTTCCATGAGCAATATCAGCACCTGAACGAATCCTTCCTTATGAACAACAACCT
GGTGTCATGGCAAATCCAAAACGGCCAGGCAAGCGGGGTGAACGCCCTGATCGATGATCTCAGAATCATGGTGAGCCTCG
ATCAAGCGGCAGCTCTATGGGGAAACAGCGAGTATAAACAAACCGCTCGGAACATCGGTGCCGCATTAAGAAAATACAAC
ATGAACAACGGGATATTGACGGACTTTTACGACTCCGCCTCTCAATCCGCGGCAAAAGATATCACGCTTTCCTATATCAT
GCCGGATGCGCTATCCATCTTGAAAAAGAATGGAGTGATAAATAAAGAACTCGAAAGTCGGAATGCCAGCATTCTTTATC
TCGCCCCTTTGAAAAACGGTTTTCTCCCAAAAGCATACAGTACAGAAACGAAAGCATACACCTATGACCATGAAGTCAAT
CTCATTGATCAGCTTTACGCAGCTTGGCATTTACCTCCGAAGGATCAAAAAGCCGCTGTATTAGCGGATTGGCTCAAACA
GACGTTTCAAACCGGCGGAAAACTGTATGGCCGGTATTCGCTCGATACAAAAAAGCCGGCGGTCCAATACGAGTCTCCAT
CCGTCTACGCGTTGGCGATTTTATTCTTCATCAACCAAAACGAAGATAAAACCGTCATTAAAGCGCTGTATGATCGAATG
AATGATTTTGAAATTCTTGATTCGTCCGAGACGTATTATGGGGGATATATGAGCGGAAATGATACGCATTCTTTTGATAA
TCTGCTGCCCCTATTAGCCGAAAGGAAGCTTTTAAATGAAAATCTCATTCAATGA

Upstream 100 bases:

>100_bases
ATAGTCCAAAAAGATCAAATAAATCTAGCAATCTCCATTTTTTCATTTATAATAAATAAGTCAAAATCATTACTCAAAAA
AACATTCGGGGTGATCTATC

Downstream 100 bases:

>100_bases
ATCGCATAAAATGTTCGCTTATATGACAGGACTTGCAGCAGCGCTTGCGTTGTTCATCCATTATATCTCAGTCCAGCGGT
TCGAACCCGTTCTCATCATT

Product: YdaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKAPVRYIWIGMILCFLSVSLAVGCIKAEDQSDDEKNDEALQPAEHFVYRHLMSDQGLIKTGFSDQPVYLSESLGLWMEF
LISKKDGEHFHEQYQHLNESFLMNNNLVSWQIQNGQASGVNALIDDLRIMVSLDQAAALWGNSEYKQTARNIGAALRKYN
MNNGILTDFYDSASQSAAKDITLSYIMPDALSILKKNGVINKELESRNASILYLAPLKNGFLPKAYSTETKAYTYDHEVN
LIDQLYAAWHLPPKDQKAAVLADWLKQTFQTGGKLYGRYSLDTKKPAVQYESPSVYALAILFFINQNEDKTVIKALYDRM
NDFEILDSSETYYGGYMSGNDTHSFDNLLPLLAERKLLNENLIQ

Sequences:

>Translated_364_residues
MKAPVRYIWIGMILCFLSVSLAVGCIKAEDQSDDEKNDEALQPAEHFVYRHLMSDQGLIKTGFSDQPVYLSESLGLWMEF
LISKKDGEHFHEQYQHLNESFLMNNNLVSWQIQNGQASGVNALIDDLRIMVSLDQAAALWGNSEYKQTARNIGAALRKYN
MNNGILTDFYDSASQSAAKDITLSYIMPDALSILKKNGVINKELESRNASILYLAPLKNGFLPKAYSTETKAYTYDHEVN
LIDQLYAAWHLPPKDQKAAVLADWLKQTFQTGGKLYGRYSLDTKKPAVQYESPSVYALAILFFINQNEDKTVIKALYDRM
NDFEILDSSETYYGGYMSGNDTHSFDNLLPLLAERKLLNENLIQ
>Mature_364_residues
MKAPVRYIWIGMILCFLSVSLAVGCIKAEDQSDDEKNDEALQPAEHFVYRHLMSDQGLIKTGFSDQPVYLSESLGLWMEF
LISKKDGEHFHEQYQHLNESFLMNNNLVSWQIQNGQASGVNALIDDLRIMVSLDQAAALWGNSEYKQTARNIGAALRKYN
MNNGILTDFYDSASQSAAKDITLSYIMPDALSILKKNGVINKELESRNASILYLAPLKNGFLPKAYSTETKAYTYDHEVN
LIDQLYAAWHLPPKDQKAAVLADWLKQTFQTGGKLYGRYSLDTKKPAVQYESPSVYALAILFFINQNEDKTVIKALYDRM
NDFEILDSSETYYGGYMSGNDTHSFDNLLPLLAERKLLNENLIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41283; Mature: 41283

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPVRYIWIGMILCFLSVSLAVGCIKAEDQSDDEKNDEALQPAEHFVYRHLMSDQGLIK
CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHCCHHHHHHHHHHHCCCCEEE
TGFSDQPVYLSESLGLWMEFLISKKDGEHFHEQYQHLNESFLMNNNLVSWQIQNGQASGV
CCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCH
NALIDDLRIMVSLDQAAALWGNSEYKQTARNIGAALRKYNMNNGILTDFYDSASQSAAKD
HHHHHHHHHEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHC
ITLSYIMPDALSILKKNGVINKELESRNASILYLAPLKNGFLPKAYSTETKAYTYDHEVN
CEEEHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHH
LIDQLYAAWHLPPKDQKAAVLADWLKQTFQTGGKLYGRYSLDTKKPAVQYESPSVYALAI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCHHEEEE
LFFINQNEDKTVIKALYDRMNDFEILDSSETYYGGYMSGNDTHSFDNLLPLLAERKLLNE
EHHEECCCCHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHH
NLIQ
HCCC
>Mature Secondary Structure
MKAPVRYIWIGMILCFLSVSLAVGCIKAEDQSDDEKNDEALQPAEHFVYRHLMSDQGLIK
CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHCCHHHHHHHHHHHCCCCEEE
TGFSDQPVYLSESLGLWMEFLISKKDGEHFHEQYQHLNESFLMNNNLVSWQIQNGQASGV
CCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCH
NALIDDLRIMVSLDQAAALWGNSEYKQTARNIGAALRKYNMNNGILTDFYDSASQSAAKD
HHHHHHHHHEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHC
ITLSYIMPDALSILKKNGVINKELESRNASILYLAPLKNGFLPKAYSTETKAYTYDHEVN
CEEEHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHH
LIDQLYAAWHLPPKDQKAAVLADWLKQTFQTGGKLYGRYSLDTKKPAVQYESPSVYALAI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCHHEEEE
LFFINQNEDKTVIKALYDRMNDFEILDSSETYYGGYMSGNDTHSFDNLLPLLAERKLLNE
EHHEECCCCHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHH
NLIQ
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]