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The map label for this gene is ydaK [H]

Identifier: 52787910

GI number: 52787910

Start: 4068173

End: 4069024

Strand: Direct

Name: ydaK [H]

Synonym: BLi04233

Alternate gene names: 52787910

Gene position: 4068173-4069024 (Clockwise)

Preceding gene: 52787909

Following gene: 52787911

Centisome position: 96.34

GC content: 46.01

Gene sequence:

>852_bases
ATGAAAATCTCATTCAATGAATCGCATAAAATGTTCGCTTATATGACAGGACTTGCAGCAGCGCTTGCGTTGTTCATCCA
TTATATCTCAGTCCAGCGGTTCGAACCCGTTCTCATCATTTGCATCACACTTGCCATCATCGCAGCAGGAATATGGCTCG
GATCGATTTACGCACTGGCTGGGACCATCATCGTCCTGTTTGTTCTCGGCACTTTGATGATGTTTTTTCACACAGGCCAA
GGAGAAGCTGCTTCGTCTGAAACCGGACTGCAAATGCTCGTCATCTGGGGAGTGGCGCTGTTGCTGTTTTCCTTTATGTC
AGGGAGAATACACGACATCGCGATCGGACTTCACCGCTCCGTCAAACACCTTCAAGACGAAATCAAAAGCTTTGTTGCGA
TTGACAGGGTGACAGGCTTTGATAATAAACAGAGGATGAAGCTGGAGCTGTCAGAAGAAATCAAGCGGGCGGAGCGGTAT
GGCAACTCGTTTGTTTTTTTACTGCTTCATATGCATTATTTCAAAGAGTTCAAATCCCTGTACGGAGAAAAAGAAACCGA
TCGTCTCTTTCAATTTGTCAGCAGTCAAATCAGATCATGTGTCCGGGAAACCGATAAAAAGTTCCGGCCTGCCGAGGAGC
GGTTCGGCATCCTGCTGACACACACGCCTGCCGAACATATGCCCGCCGTCCTTGAAAAACTGAAGAAACAGCTGGATACG
TACCAGCTGAAAAACGGCAAGTATGTCACCTTGACCTTCCACGTGTGCCACTTATCATATCAGAACGATTTAAAGACTGC
CGATCAATTTTTAGAAGAACTAGAAAACGAGATGATGATGAATGAACTGTAA

Upstream 100 bases:

>100_bases
CTTGATTCGTCCGAGACGTATTATGGGGGATATATGAGCGGAAATGATACGCATTCTTTTGATAATCTGCTGCCCCTATT
AGCCGAAAGGAAGCTTTTAA

Downstream 100 bases:

>100_bases
GCGGCTATTACTTCTATACGCGGCTGTGCTTATCCTGTCTGCGGCTTTTTATGTTCCGGACAGCGCCGAGGCAAAGCAGC
AGGAGCACGGCATTCTCATC

Product: YdaK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKISFNESHKMFAYMTGLAAALALFIHYISVQRFEPVLIICITLAIIAAGIWLGSIYALAGTIIVLFVLGTLMMFFHTGQ
GEAASSETGLQMLVIWGVALLLFSFMSGRIHDIAIGLHRSVKHLQDEIKSFVAIDRVTGFDNKQRMKLELSEEIKRAERY
GNSFVFLLLHMHYFKEFKSLYGEKETDRLFQFVSSQIRSCVRETDKKFRPAEERFGILLTHTPAEHMPAVLEKLKKQLDT
YQLKNGKYVTLTFHVCHLSYQNDLKTADQFLEELENEMMMNEL

Sequences:

>Translated_283_residues
MKISFNESHKMFAYMTGLAAALALFIHYISVQRFEPVLIICITLAIIAAGIWLGSIYALAGTIIVLFVLGTLMMFFHTGQ
GEAASSETGLQMLVIWGVALLLFSFMSGRIHDIAIGLHRSVKHLQDEIKSFVAIDRVTGFDNKQRMKLELSEEIKRAERY
GNSFVFLLLHMHYFKEFKSLYGEKETDRLFQFVSSQIRSCVRETDKKFRPAEERFGILLTHTPAEHMPAVLEKLKKQLDT
YQLKNGKYVTLTFHVCHLSYQNDLKTADQFLEELENEMMMNEL
>Mature_283_residues
MKISFNESHKMFAYMTGLAAALALFIHYISVQRFEPVLIICITLAIIAAGIWLGSIYALAGTIIVLFVLGTLMMFFHTGQ
GEAASSETGLQMLVIWGVALLLFSFMSGRIHDIAIGLHRSVKHLQDEIKSFVAIDRVTGFDNKQRMKLELSEEIKRAERY
GNSFVFLLLHMHYFKEFKSLYGEKETDRLFQFVSSQIRSCVRETDKKFRPAEERFGILLTHTPAEHMPAVLEKLKKQLDT
YQLKNGKYVTLTFHVCHLSYQNDLKTADQFLEELENEMMMNEL

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 32534; Mature: 32534

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]