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The map label for this gene is yxdJ [H]

Identifier: 52787821

GI number: 52787821

Start: 3971145

End: 3971444

Strand: Direct

Name: yxdJ [H]

Synonym: BLi04144

Alternate gene names: 52787821

Gene position: 3971145-3971444 (Clockwise)

Preceding gene: 52787820

Following gene: 52787822

Centisome position: 94.04

GC content: 45.0

Gene sequence:

>300_bases
GTGATTGAATTTGAAGGCGTCCAGCTGTTTGTCGAACGTTTTGAGCTGCACTGCCGAAATGAGAAGCTCGAGCTTTCAAA
AAAGGAAAGCAAGCTCTTGGAAGTGCTGCTTGAAAGAGGAGAAAAGGTGACAAGCAGAGACCGGTTAATGGAGAAGACAT
GGGAAACCGATACATTTGTAGATGAAAACACGCTAAATGTCTATATTACAAGGATTCGCAAAAAACTGCGAAGCATGGAC
GTGCCCTTCTCAATTGAATCTGTGCGGGGCGAAGGGTATCAGCTGAGGACGAAATCATGA

Upstream 100 bases:

>100_bases
ATTATATAGAGAAGCCTTTTTCCTATGAGGTGGTCTCGCTAAAATTAAAGGCCAAATTCGCAGGGCATTTGGAGAATACG
CAGTAAAACAAGGTGAAAAA

Downstream 100 bases:

>100_bases
AGCTGTTCCTAAAAAACCATGCCGTTCTCATTTTTCTGTTTCTCTTTCAGGGCGGATTCGTATTTTTTTACTATTGGTTT
GCCGGCATGCAGACTTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MIEFEGVQLFVERFELHCRNEKLELSKKESKLLEVLLERGEKVTSRDRLMEKTWETDTFVDENTLNVYITRIRKKLRSMD
VPFSIESVRGEGYQLRTKS

Sequences:

>Translated_99_residues
MIEFEGVQLFVERFELHCRNEKLELSKKESKLLEVLLERGEKVTSRDRLMEKTWETDTFVDENTLNVYITRIRKKLRSMD
VPFSIESVRGEGYQLRTKS
>Mature_99_residues
MIEFEGVQLFVERFELHCRNEKLELSKKESKLLEVLLERGEKVTSRDRLMEKTWETDTFVDENTLNVYITRIRKKLRSMD
VPFSIESVRGEGYQLRTKS

Specific function: Probable member of the two-component regulatory system yxdK/yxdJ. Positively regulates the expression of the yxdLMyxeA operon by direct interaction with its promoter region. Could also indirectly regulate the expression of the dlt operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=98, Percent_Identity=32.6530612244898, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 11858; Mature: 11858

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFEGVQLFVERFELHCRNEKLELSKKESKLLEVLLERGEKVTSRDRLMEKTWETDTFV
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
DENTLNVYITRIRKKLRSMDVPFSIESVRGEGYQLRTKS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MIEFEGVQLFVERFELHCRNEKLELSKKESKLLEVLLERGEKVTSRDRLMEKTWETDTFV
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
DENTLNVYITRIRKKLRSMDVPFSIESVRGEGYQLRTKS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377 [H]