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The map label for this gene is sacT [H]

Identifier: 52787695

GI number: 52787695

Start: 3841417

End: 3842256

Strand: Reverse

Name: sacT [H]

Synonym: BLi04018

Alternate gene names: 52787695

Gene position: 3842256-3841417 (Counterclockwise)

Preceding gene: 52787698

Following gene: 52787694

Centisome position: 90.99

GC content: 40.0

Gene sequence:

>840_bases
GTGACAGCTTTGAAAATCTATAAAGTATTGAACAACAATGCAGCAATCATAAAGGAGGATGGTCAAGAAAAAATTGTCAT
GGGACCTGGTATCGCTTTTCAAAAAGGCAAAAACGATACCATTCCAAGAAACAAGGTAGAAAAAATTTTTACCATTCATG
AAGAAAATGAAAAGTTTAAACAAATCCTCGAAACACTTCCGGAAGAACATATTGAAGCTGCCGAAGAGATCATCAGCTAT
GCGGAAGGGCAGCTGTCCGCACCGTTGAGCGATCATATCCACATCGCCCTTGTGGATCATTTGTCATTTGCGATCGAGCG
AGTCCGCAAAGGATTCGTCATTCAAAATAAATTGTTAAATGAAATCAAAGCGCTTTATAAAAAAGAATATGAGATCGGAC
TCTGGGCAATCGATTTGGTCAAAGAAAAACTGAAAGTCGAATTGCCTGATGATGAAGCGGGTTATATTGCGCTGCATATT
CATACCGCAAAAATGGATGCGGAAAACATGCAGAAGACTCTAAAATACACGAACATCATCAAAGAATTGATAGAAAAAAT
CGAATGCTGTTTCAATCAGAAGATTGACGAAAACAGCATCTCATATCAGCGTCTTGTCACGCATCTCAGGTATGCCATCA
ACCGGCTGGAATCAAATGAAGCGTTTCATGTCATGGACGATGACATGCTTTATTTCATCCGGCAAAAGTATCCTGAAAGC
TACCGATGTGCGGCAGGGCTGGCGGATTACGTAAAAACTGAATATGATCTTCATCTTCCGGAATCAGAAGTCGGATATAT
TACGCTGCATGTCCAGCGTTTAAATGATTCCTATAGGTAA

Upstream 100 bases:

>100_bases
CCGGGCTGTTTGCAAAAAAGCGGTGAAAAGGGTAAGAGCCGGACCAACTCTTTACACGGGAACTTAAACAAGGTAAAATC
CCACTCATAATGGGAAGTGG

Downstream 100 bases:

>100_bases
TACCGCCTGATATCGCGCGATCAGGCTTTTTTTAGGTCGATTTTCACAGAGAATAAAAAAGTAGTTGACGAAAGCGTTAT
CACATAATAAAATGAAAGCG

Product: SacT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTALKIYKVLNNNAAIIKEDGQEKIVMGPGIAFQKGKNDTIPRNKVEKIFTIHEENEKFKQILETLPEEHIEAAEEIISY
AEGQLSAPLSDHIHIALVDHLSFAIERVRKGFVIQNKLLNEIKALYKKEYEIGLWAIDLVKEKLKVELPDDEAGYIALHI
HTAKMDAENMQKTLKYTNIIKELIEKIECCFNQKIDENSISYQRLVTHLRYAINRLESNEAFHVMDDDMLYFIRQKYPES
YRCAAGLADYVKTEYDLHLPESEVGYITLHVQRLNDSYR

Sequences:

>Translated_279_residues
MTALKIYKVLNNNAAIIKEDGQEKIVMGPGIAFQKGKNDTIPRNKVEKIFTIHEENEKFKQILETLPEEHIEAAEEIISY
AEGQLSAPLSDHIHIALVDHLSFAIERVRKGFVIQNKLLNEIKALYKKEYEIGLWAIDLVKEKLKVELPDDEAGYIALHI
HTAKMDAENMQKTLKYTNIIKELIEKIECCFNQKIDENSISYQRLVTHLRYAINRLESNEAFHVMDDDMLYFIRQKYPES
YRCAAGLADYVKTEYDLHLPESEVGYITLHVQRLNDSYR
>Mature_278_residues
TALKIYKVLNNNAAIIKEDGQEKIVMGPGIAFQKGKNDTIPRNKVEKIFTIHEENEKFKQILETLPEEHIEAAEEIISYA
EGQLSAPLSDHIHIALVDHLSFAIERVRKGFVIQNKLLNEIKALYKKEYEIGLWAIDLVKEKLKVELPDDEAGYIALHIH
TAKMDAENMQKTLKYTNIIKELIEKIECCFNQKIDENSISYQRLVTHLRYAINRLESNEAFHVMDDDMLYFIRQKYPESY
RCAAGLADYVKTEYDLHLPESEVGYITLHVQRLNDSYR

Specific function: Mediates positive regulation of the sacPA operon by functioning as an antiterminator factor of transcription [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=274, Percent_Identity=33.9416058394161, Blast_Score=184, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 32415; Mature: 32283

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALKIYKVLNNNAAIIKEDGQEKIVMGPGIAFQKGKNDTIPRNKVEKIFTIHEENEKFK
CCHHHEEHHHCCCCEEEEECCCEEEEECCCCEEECCCCCCCCHHHHHHHHEEECCCHHHH
QILETLPEEHIEAAEEIISYAEGQLSAPLSDHIHIALVDHLSFAIERVRKGFVIQNKLLN
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHH
EIKALYKKEYEIGLWAIDLVKEKLKVELPDDEAGYIALHIHTAKMDAENMQKTLKYTNII
HHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
KELIEKIECCFNQKIDENSISYQRLVTHLRYAINRLESNEAFHVMDDDMLYFIRQKYPES
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCH
YRCAAGLADYVKTEYDLHLPESEVGYITLHVQRLNDSYR
HHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure 
TALKIYKVLNNNAAIIKEDGQEKIVMGPGIAFQKGKNDTIPRNKVEKIFTIHEENEKFK
CHHHEEHHHCCCCEEEEECCCEEEEECCCCEEECCCCCCCCHHHHHHHHEEECCCHHHH
QILETLPEEHIEAAEEIISYAEGQLSAPLSDHIHIALVDHLSFAIERVRKGFVIQNKLLN
HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCHHHHHHHHH
EIKALYKKEYEIGLWAIDLVKEKLKVELPDDEAGYIALHIHTAKMDAENMQKTLKYTNII
HHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
KELIEKIECCFNQKIDENSISYQRLVTHLRYAINRLESNEAFHVMDDDMLYFIRQKYPES
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCH
YRCAAGLADYVKTEYDLHLPESEVGYITLHVQRLNDSYR
HHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2163394; 7934828; 9384377 [H]