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The map label for this gene is ywcH [H]

Identifier: 52787698

GI number: 52787698

Start: 3845838

End: 3846845

Strand: Reverse

Name: ywcH [H]

Synonym: BLi04021

Alternate gene names: 52787698

Gene position: 3846845-3845838 (Counterclockwise)

Preceding gene: 52787699

Following gene: 52787695

Centisome position: 91.1

GC content: 51.29

Gene sequence:

>1008_bases
ATGTTGTCATTAAGCATACTGGATCAGACTCCTGTTTCTGAAGGAAGCAAACCTGAACTGGCTTTGCAGCATACGGTGGA
GCTTGCGCAAGCGGCGGAGCGGCTCGGATACAAGAGGTTTTGGGTTTCTGAGCACCATTTTTCCAGGAACTTGGCAGGGT
CAAGTCCGGAGGTTCTGATCGGTTATCTTGCGGCTAAAACAGAGAAGATCCGTATAGGATCCGGCGGCGTCATGCTTCCG
CATTACAGCGCCTACAAGGTGGCGGAAAACTTCCGCGTCTTGGAAGGACTAGCGCCCGGCAGGATTGATCTAGGTGTCGG
ACGTGCTCCGGGAGGGATGCCGATCGCTTCAATGGCCCTTCAAAATGGAGGAAGACGGATGGCTGACCAATATCCAGAAC
AAATTCAGGACCTCGTCACATATTTATACGATCAAGCCGATGAACATCACCGCTTTCCCAACTTGACCGCAACGCCGAAC
ATCGCCACAGCGCCCGCTGTTTGGCTGCTCGGCTCCTCAGGGGAAAGCGCAAGGCTTGCCGCCCAAACAGGGGCATCATA
TACATTTGCTCAATTTATTAACGGTGAAGGCGGAGAAGAGGCGGCCAGACTGTACAAAGAGAGGTTCGAACCTTCTGTAT
TAGGGGAACAGCCAAATGTGATCGTTGCCGTATTTGTGATTTGCGCTGAGACAGAAGAGAAAGCGGAGAACCTTGCCAAA
AGCTTGGATTTTTCTTTATTGGCCAATGAACAGGGGATGGTGACCGAAGGCTTTCCATCATTGGAAACGGCCCTGTCCTA
TCAATATTCTCCTTATGAAAGAAAGAGAGTGGAAGACAATCGAAAACGGATGGTCATCGGAACGCCGCAGCAGGTAAAGG
AACAGCTGCTTGAACTGGCCGGCGCTTACGGAACGGACGAAATCATGGCGGTGACGATCACCCACGATTTTCAAGACAGA
TTGGATTCATACCGGCTGCTGGCCGAAGCGTTTCATCAGTCAATTTAG

Upstream 100 bases:

>100_bases
TTCGTCTCATTCATCAGTACTGGGAGCTCCTTTAGTTTATCCATGATACTATTATTTCTTTTTGCGCAGAAAAAGTAAAC
GAAGATTTGGGGTGAAAAAG

Downstream 100 bases:

>100_bases
CGTTTTTGCTGAAAAAAATCGAGAAAATGGCGGATTGGGAAAAGAATAAACAGAATGCATATGTATAAAGCGGTAAACAG
CCAGCTGATCGGAATGAGGA

Product: YwcH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MLSLSILDQTPVSEGSKPELALQHTVELAQAAERLGYKRFWVSEHHFSRNLAGSSPEVLIGYLAAKTEKIRIGSGGVMLP
HYSAYKVAENFRVLEGLAPGRIDLGVGRAPGGMPIASMALQNGGRRMADQYPEQIQDLVTYLYDQADEHHRFPNLTATPN
IATAPAVWLLGSSGESARLAAQTGASYTFAQFINGEGGEEAARLYKERFEPSVLGEQPNVIVAVFVICAETEEKAENLAK
SLDFSLLANEQGMVTEGFPSLETALSYQYSPYERKRVEDNRKRMVIGTPQQVKEQLLELAGAYGTDEIMAVTITHDFQDR
LDSYRLLAEAFHQSI

Sequences:

>Translated_335_residues
MLSLSILDQTPVSEGSKPELALQHTVELAQAAERLGYKRFWVSEHHFSRNLAGSSPEVLIGYLAAKTEKIRIGSGGVMLP
HYSAYKVAENFRVLEGLAPGRIDLGVGRAPGGMPIASMALQNGGRRMADQYPEQIQDLVTYLYDQADEHHRFPNLTATPN
IATAPAVWLLGSSGESARLAAQTGASYTFAQFINGEGGEEAARLYKERFEPSVLGEQPNVIVAVFVICAETEEKAENLAK
SLDFSLLANEQGMVTEGFPSLETALSYQYSPYERKRVEDNRKRMVIGTPQQVKEQLLELAGAYGTDEIMAVTITHDFQDR
LDSYRLLAEAFHQSI
>Mature_335_residues
MLSLSILDQTPVSEGSKPELALQHTVELAQAAERLGYKRFWVSEHHFSRNLAGSSPEVLIGYLAAKTEKIRIGSGGVMLP
HYSAYKVAENFRVLEGLAPGRIDLGVGRAPGGMPIASMALQNGGRRMADQYPEQIQDLVTYLYDQADEHHRFPNLTATPN
IATAPAVWLLGSSGESARLAAQTGASYTFAQFINGEGGEEAARLYKERFEPSVLGEQPNVIVAVFVICAETEEKAENLAK
SLDFSLLANEQGMVTEGFPSLETALSYQYSPYERKRVEDNRKRMVIGTPQQVKEQLLELAGAYGTDEIMAVTITHDFQDR
LDSYRLLAEAFHQSI

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=325, Percent_Identity=36, Blast_Score=198, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 36885; Mature: 36885

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLSILDQTPVSEGSKPELALQHTVELAQAAERLGYKRFWVSEHHFSRNLAGSSPEVLI
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCHHHHHHCCCCCCHHHHH
GYLAAKTEKIRIGSGGVMLPHYSAYKVAENFRVLEGLAPGRIDLGVGRAPGGMPIASMAL
HHHHCCCEEEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHH
QNGGRRMADQYPEQIQDLVTYLYDQADEHHRFPNLTATPNIATAPAVWLLGSSGESARLA
HCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
AQTGASYTFAQFINGEGGEEAARLYKERFEPSVLGEQPNVIVAVFVICAETEEKAENLAK
HHCCCCEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCHHHHHHHHH
SLDFSLLANEQGMVTEGFPSLETALSYQYSPYERKRVEDNRKRMVIGTPQQVKEQLLELA
HCCHHEEECCCCCEECCCCHHHHHHHCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHH
GAYGTDEIMAVTITHDFQDRLDSYRLLAEAFHQSI
CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSLSILDQTPVSEGSKPELALQHTVELAQAAERLGYKRFWVSEHHFSRNLAGSSPEVLI
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCHHHHHHCCCCCCHHHHH
GYLAAKTEKIRIGSGGVMLPHYSAYKVAENFRVLEGLAPGRIDLGVGRAPGGMPIASMAL
HHHHCCCEEEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHH
QNGGRRMADQYPEQIQDLVTYLYDQADEHHRFPNLTATPNIATAPAVWLLGSSGESARLA
HCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
AQTGASYTFAQFINGEGGEEAARLYKERFEPSVLGEQPNVIVAVFVICAETEEKAENLAK
HHCCCCEEHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCHHHHHHHHH
SLDFSLLANEQGMVTEGFPSLETALSYQYSPYERKRVEDNRKRMVIGTPQQVKEQLLELA
HCCHHEEECCCCCEECCCCHHHHHHHCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHH
GAYGTDEIMAVTITHDFQDRLDSYRLLAEAFHQSI
CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]