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The map label for this gene is ywhD [H]

Identifier: 52787656

GI number: 52787656

Start: 3805740

End: 3806255

Strand: Reverse

Name: ywhD [H]

Synonym: BLi03978

Alternate gene names: 52787656

Gene position: 3806255-3805740 (Counterclockwise)

Preceding gene: 52787657

Following gene: 52787652

Centisome position: 90.14

GC content: 48.45

Gene sequence:

>516_bases
ATGGAACAAGGAAAAAAGAAAAAAACAATCGGATTCAACATTATTAAAAGCGATCCGACAGACGGACACGGGGGATTTGG
AGCAGGCGCATTAAGCCTTGACAACATCTCGCCTGTCATTGTCGATGTTGAAGAGAAAGAAGCGTTTGTGGATATCGGCG
CCATGCACGCCCGCAGCACGGTTGAAAAAGGAATCAAATTTTTGCCGAACAAAGAAGAGGTGCCGAACGGAAAACCTTAC
TGGCTTGTGTGGGTTACGATCGACCGCAGGGAAGAAGGCCCTTATTATGCGGGTGTGACGGCATGCGAAATGACGGTCGA
CAGAAGCATCCGCCGCGGCTACAAATCGCTTCCGGAGCACGTCAATTTAATGGATAAGTCGATGAAGCGGAAGATTATCG
TCGAGCATATGGATGAAGGTTCTAAGCGCGTTCTTGCCGATTTTCTGAAAAACCATGATCAAGGGCTTTGGGACCGTTCA
TCAGACGAGCTGAAAAAGGGACTGCTCCAGCAATAG

Upstream 100 bases:

>100_bases
TGGCCAATATGTATTCTGGCCGTTTTTGAATGACGGGCGGGAATTGATCATATCGATATTTAACAGCGTTTTCCGGCCGC
TGATGTAGGAGGTATTTTTG

Downstream 100 bases:

>100_bases
GAAAAACCCCCCGGACTGCCATGAAGTCCGGGGGGTTCGTCTATCCCCCTAAAAAGTTTATTCTCCTTTTTTAAACCATT
TTTCCCACCACTTTTGCCGC

Product: YwhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MEQGKKKKTIGFNIIKSDPTDGHGGFGAGALSLDNISPVIVDVEEKEAFVDIGAMHARSTVEKGIKFLPNKEEVPNGKPY
WLVWVTIDRREEGPYYAGVTACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVEHMDEGSKRVLADFLKNHDQGLWDRS
SDELKKGLLQQ

Sequences:

>Translated_171_residues
MEQGKKKKTIGFNIIKSDPTDGHGGFGAGALSLDNISPVIVDVEEKEAFVDIGAMHARSTVEKGIKFLPNKEEVPNGKPY
WLVWVTIDRREEGPYYAGVTACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVEHMDEGSKRVLADFLKNHDQGLWDRS
SDELKKGLLQQ
>Mature_171_residues
MEQGKKKKTIGFNIIKSDPTDGHGGFGAGALSLDNISPVIVDVEEKEAFVDIGAMHARSTVEKGIKFLPNKEEVPNGKPY
WLVWVTIDRREEGPYYAGVTACEMTVDRSIRRGYKSLPEHVNLMDKSMKRKIIVEHMDEGSKRVLADFLKNHDQGLWDRS
SDELKKGLLQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014852 [H]

Pfam domain/function: PF08741 YwhD [H]

EC number: NA

Molecular weight: Translated: 19285; Mature: 19285

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQGKKKKTIGFNIIKSDPTDGHGGFGAGALSLDNISPVIVDVEEKEAFVDIGAMHARST
CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHH
VEKGIKFLPNKEEVPNGKPYWLVWVTIDRREEGPYYAGVTACEMTVDRSIRRGYKSLPEH
HHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH
VNLMDKSMKRKIIVEHMDEGSKRVLADFLKNHDQGLWDRSSDELKKGLLQQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MEQGKKKKTIGFNIIKSDPTDGHGGFGAGALSLDNISPVIVDVEEKEAFVDIGAMHARST
CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHH
VEKGIKFLPNKEEVPNGKPYWLVWVTIDRREEGPYYAGVTACEMTVDRSIRRGYKSLPEH
HHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH
VNLMDKSMKRKIIVEHMDEGSKRVLADFLKNHDQGLWDRSSDELKKGLLQQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]