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The map label for this gene is ywhC [H]

Identifier: 52787657

GI number: 52787657

Start: 3806268

End: 3806957

Strand: Reverse

Name: ywhC [H]

Synonym: BLi03979

Alternate gene names: 52787657

Gene position: 3806957-3806268 (Counterclockwise)

Preceding gene: 52787659

Following gene: 52787656

Centisome position: 90.16

GC content: 47.83

Gene sequence:

>690_bases
TTGTATATGAGAAAGAGGGAAAGCCACATTTTAGACCGTTTTCTTATTTATCCGCTGGAAATGATTCCGTATGTTGTTTT
GACACTTGCTGCCGCATTCACTGTGCATGAGGTCGCCCATGCGTATGTGGCTTACAAATTCGGCGATGAGACGGCCAAAC
GGCAGGGCAGGCTGACGCTCAACCCGCTTAAGCATCTTGATCCGTTTGGAACGATTTTGATCTTTATATTGGGATTCGGC
TGGGCAAAGCCGGTGCCCGTTAACCGCTTTTATTTTAAAAACCCGAGGCTGGCCGGATTTCTCGTGTCAATCGCCGGACC
GATCAGCAATCTGATCCTTGCTTTCATCGGTTTTATATTGCTGCTTTTGTCCGTGAAGCTGTCCGGGACGCTGCCTGCCG
GTTTTTACAGCGGTTTGCTTCAATTTTTTACGATTTGGGTGAATCTCAACCTGCTTTTATTTCTGTTTAATTTAATGCCG
TTCCCGCCTCTTGACGGTTTTCGGGTTATACAGGATGTGGTCGCCCCCGAAGTGCGGGCGAAGCTGTCGAAATATGAGGC
GTACGGCTCGATCGTCTTTCTGATTATCGTCATTACACCGCTTGGCCAATATGTATTCTGGCCGTTTTTGAATGACGGGC
GGGAATTGATCATATCGATATTTAACAGCGTTTTCCGGCCGCTGATGTAG

Upstream 100 bases:

>100_bases
TGAACAGTTACGTATGGCATATGTTCTCCTCCTCCTTTTAAAAAATGGCTGCTCACTTTAGCATCAGGTTCTCTTATAGT
ATACTGGAGATAGTAAATCT

Downstream 100 bases:

>100_bases
GAGGTATTTTTGATGGAACAAGGAAAAAAGAAAAAAACAATCGGATTCAACATTATTAAAAGCGATCCGACAGACGGACA
CGGGGGATTTGGAGCAGGCG

Product: YwhC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MYMRKRESHILDRFLIYPLEMIPYVVLTLAAAFTVHEVAHAYVAYKFGDETAKRQGRLTLNPLKHLDPFGTILIFILGFG
WAKPVPVNRFYFKNPRLAGFLVSIAGPISNLILAFIGFILLLLSVKLSGTLPAGFYSGLLQFFTIWVNLNLLLFLFNLMP
FPPLDGFRVIQDVVAPEVRAKLSKYEAYGSIVFLIIVITPLGQYVFWPFLNDGRELIISIFNSVFRPLM

Sequences:

>Translated_229_residues
MYMRKRESHILDRFLIYPLEMIPYVVLTLAAAFTVHEVAHAYVAYKFGDETAKRQGRLTLNPLKHLDPFGTILIFILGFG
WAKPVPVNRFYFKNPRLAGFLVSIAGPISNLILAFIGFILLLLSVKLSGTLPAGFYSGLLQFFTIWVNLNLLLFLFNLMP
FPPLDGFRVIQDVVAPEVRAKLSKYEAYGSIVFLIIVITPLGQYVFWPFLNDGRELIISIFNSVFRPLM
>Mature_229_residues
MYMRKRESHILDRFLIYPLEMIPYVVLTLAAAFTVHEVAHAYVAYKFGDETAKRQGRLTLNPLKHLDPFGTILIFILGFG
WAKPVPVNRFYFKNPRLAGFLVSIAGPISNLILAFIGFILLLLSVKLSGTLPAGFYSGLLQFFTIWVNLNLLLFLFNLMP
FPPLDGFRVIQDVVAPEVRAKLSKYEAYGSIVFLIIVITPLGQYVFWPFLNDGRELIISIFNSVFRPLM

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 26081; Mature: 26081

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMRKRESHILDRFLIYPLEMIPYVVLTLAAAFTVHEVAHAYVAYKFGDETAKRQGRLTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEE
NPLKHLDPFGTILIFILGFGWAKPVPVNRFYFKNPRLAGFLVSIAGPISNLILAFIGFIL
CHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLLSVKLSGTLPAGFYSGLLQFFTIWVNLNLLLFLFNLMPFPPLDGFRVIQDVVAPEVRA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
KLSKYEAYGSIVFLIIVITPLGQYVFWPFLNDGRELIISIFNSVFRPLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYMRKRESHILDRFLIYPLEMIPYVVLTLAAAFTVHEVAHAYVAYKFGDETAKRQGRLTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEE
NPLKHLDPFGTILIFILGFGWAKPVPVNRFYFKNPRLAGFLVSIAGPISNLILAFIGFIL
CHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLLSVKLSGTLPAGFYSGLLQFFTIWVNLNLLLFLFNLMPFPPLDGFRVIQDVVAPEVRA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
KLSKYEAYGSIVFLIIVITPLGQYVFWPFLNDGRELIISIFNSVFRPLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]