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The map label for this gene is racA

Identifier: 52787629

GI number: 52787629

Start: 3775225

End: 3775785

Strand: Direct

Name: racA

Synonym: BLi03951

Alternate gene names: 52787629

Gene position: 3775225-3775785 (Clockwise)

Preceding gene: 52787628

Following gene: 52787640

Centisome position: 89.4

GC content: 46.52

Gene sequence:

>561_bases
ATGAATACTGCTGATGCGGCAAATGAACTGGGGGTTTCAACCAAAACGGTGCAGCGTTGGGTCAAGCAGCTGCAACTGCC
CGCTTCCCGAAATGAGCTTGGCCACTACTTTTTCACGGAAGACGATATCGCCATTTTAAAAGAAGTAAAAGAGCAGTTGA
AAAACGGTACGCCTATGCAGGATGTCACGGTCAAACGCCCGAAAAAAACCTTCTTCATCAAGAAAAACGAAATGATTCAA
ACGAAAGAGCCTGCACTGCAATTGAATGAGCGGCTCGAAGAAAGGCTGCAGCGTTTTTTAGAGCATGAACAGCTTGAACG
CGAGCTGCTCCAAAAGAAAATCGCCGAGCTGGAAAGAAAGCTGGAGCAAAAAGCGGACGAGGTCGTCTCCTACCAGCTTC
TGCAGCAAAGGCGCGAACTTGAAGAAGAACGGCAGCAGATCAAGCATCTCGAGCAGAAAATCAGCCAATTGGAAAGCATG
AACCGCCGGGAAAAAGATACAGCCGTCAGAAGAGAAGAAAAAAAACCGAAGAGCAAATTGAAATCGATCTTCTCTTTTTA
A

Upstream 100 bases:

>100_bases
TGCCGAATCCCTTCTTCTTTTGTCTAACAGGAAGGAGGCCTTTTCATTCAGGTCGAATACCCTTTTTAATGAACAGTTAC
AGGTTAAAAGGAGGTATCTT

Downstream 100 bases:

>100_bases
AGCGCAAAAAAGCTTGCAAGGCCATAAACGGCTTCTTGCAAGCTTTTTTCTTACTTAAGCTGTAATTGCAATCAATATCG
GCAGCGAAATAATTGACAGC

Product: polar chromosome segregation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNTADAANELGVSTKTVQRWVKQLQLPASRNELGHYFFTEDDIAILKEVKEQLKNGTPMQDVTVKRPKKTFFIKKNEMIQ
TKEPALQLNERLEERLQRFLEHEQLERELLQKKIAELERKLEQKADEVVSYQLLQQRRELEEERQQIKHLEQKISQLESM
NRREKDTAVRREEKKPKSKLKSIFSF

Sequences:

>Translated_186_residues
MNTADAANELGVSTKTVQRWVKQLQLPASRNELGHYFFTEDDIAILKEVKEQLKNGTPMQDVTVKRPKKTFFIKKNEMIQ
TKEPALQLNERLEERLQRFLEHEQLERELLQKKIAELERKLEQKADEVVSYQLLQQRRELEEERQQIKHLEQKISQLESM
NRREKDTAVRREEKKPKSKLKSIFSF
>Mature_186_residues
MNTADAANELGVSTKTVQRWVKQLQLPASRNELGHYFFTEDDIAILKEVKEQLKNGTPMQDVTVKRPKKTFFIKKNEMIQ
TKEPALQLNERLEERLQRFLEHEQLERELLQKKIAELERKLEQKADEVVSYQLLQQRRELEEERQQIKHLEQKISQLESM
NRREKDTAVRREEKKPKSKLKSIFSF

Specific function: Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentiall

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to cell poles and nucleoid (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the racA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RACA_BACLD (Q65DU9)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_081028.1
- RefSeq:   YP_093458.1
- ProteinModelPortal:   Q65DU9
- SMR:   Q65DU9
- STRING:   Q65DU9
- EnsemblBacteria:   EBBACT00000058326
- EnsemblBacteria:   EBBACT00000060023
- GeneID:   3029046
- GeneID:   3101336
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi03951
- KEGG:   bli:BL04032
- NMPDR:   fig|279010.5.peg.4088
- eggNOG:   COG0789
- GeneTree:   EBGT00050000002443
- HOGENOM:   HBG345303
- OMA:   KTVQRWV
- ProtClustDB:   PRK13182
- BioCyc:   BLIC279010-1:BLI03951-MONOMER
- BioCyc:   BLIC279010:BL04032-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01170
- InterPro:   IPR009061

Pfam domain/function: SSF46955 Putativ_DNA_bind

EC number: NA

Molecular weight: Translated: 22260; Mature: 22260

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTADAANELGVSTKTVQRWVKQLQLPASRNELGHYFFTEDDIAILKEVKEQLKNGTPMQ
CCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCHHCCCHHHHHHHHHHHHHHCCCCCC
DVTVKRPKKTFFIKKNEMIQTKEPALQLNERLEERLQRFLEHEQLERELLQKKIAELERK
CCHHCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQKADEVVSYQLLQQRRELEEERQQIKHLEQKISQLESMNRREKDTAVRREEKKPKSKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KSIFSF
HHHHCC
>Mature Secondary Structure
MNTADAANELGVSTKTVQRWVKQLQLPASRNELGHYFFTEDDIAILKEVKEQLKNGTPMQ
CCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCHHCCCHHHHHHHHHHHHHHCCCCCC
DVTVKRPKKTFFIKKNEMIQTKEPALQLNERLEERLQRFLEHEQLERELLQKKIAELERK
CCHHCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQKADEVVSYQLLQQRRELEEERQQIKHLEQKISQLESMNRREKDTAVRREEKKPKSKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KSIFSF
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA