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The map label for this gene is ywkD [H]

Identifier: 52787628

GI number: 52787628

Start: 3774705

End: 3775088

Strand: Direct

Name: ywkD [H]

Synonym: BLi03950

Alternate gene names: 52787628

Gene position: 3774705-3775088 (Clockwise)

Preceding gene: 52787625

Following gene: 52787629

Centisome position: 89.39

GC content: 51.82

Gene sequence:

>384_bases
ATGCTGGAATCGATTCATCACATCGCCATCATATGCTCGGATTATGAAGCATCCAAAACATTCTATGTCGACAAGCTCGG
ACTTGAGATTCTGAGCGAAACGTACAGAAAGGATCAGGAATCATATAAACTGGACCTCTCATTAAACGGCCGCTATGTCA
TCGAACTGTTTTCTTTTCCGGATCCGCCCGCACGCCTTACCAGACCCGAAGCTGCCGGACTCCGCCATTTGGCTTTCACG
GTGGCCGATCTTGACCAGACCGTCAAGGAGCTCAAGCAAAAAGGCATCACTGCTGAACCGATCCGCACCGATCCCGGGAC
GGGCAAGCGCTATACGTTCTTCTCCGACCCGGACGGCCTGCCTTTAGAGCTTTACGAAGCATAG

Upstream 100 bases:

>100_bases
ATTATAGTATAGGGACTCTTCCCCGTCAAAACAACTTCGCCGTTATCGGCAGCAGCCGCGTCTTTTTGCTATACTTTTAA
GAAAAAAGGAGCTTGACTCA

Downstream 100 bases:

>100_bases
CAACGGCTGCACCCTCTGGGGAAAAACCGCTTTCTTTGCCGAATCCCTTCTTCTTTTGTCTAACAGGAAGGAGGCCTTTT
CATTCAGGTCGAATACCCTT

Product: YwkD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLESIHHIAIICSDYEASKTFYVDKLGLEILSETYRKDQESYKLDLSLNGRYVIELFSFPDPPARLTRPEAAGLRHLAFT
VADLDQTVKELKQKGITAEPIRTDPGTGKRYTFFSDPDGLPLELYEA

Sequences:

>Translated_127_residues
MLESIHHIAIICSDYEASKTFYVDKLGLEILSETYRKDQESYKLDLSLNGRYVIELFSFPDPPARLTRPEAAGLRHLAFT
VADLDQTVKELKQKGITAEPIRTDPGTGKRYTFFSDPDGLPLELYEA
>Mature_127_residues
MLESIHHIAIICSDYEASKTFYVDKLGLEILSETYRKDQESYKLDLSLNGRYVIELFSFPDPPARLTRPEAAGLRHLAFT
VADLDQTVKELKQKGITAEPIRTDPGTGKRYTFFSDPDGLPLELYEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081697, Length=125, Percent_Identity=61.6, Blast_Score=164, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14412; Mature: 14412

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESIHHIAIICSDYEASKTFYVDKLGLEILSETYRKDQESYKLDLSLNGRYVIELFSFP
CCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCC
DPPARLTRPEAAGLRHLAFTVADLDQTVKELKQKGITAEPIRTDPGTGKRYTFFSDPDGL
CCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCC
PLELYEA
CEEEECC
>Mature Secondary Structure
MLESIHHIAIICSDYEASKTFYVDKLGLEILSETYRKDQESYKLDLSLNGRYVIELFSFP
CCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCC
DPPARLTRPEAAGLRHLAFTVADLDQTVKELKQKGITAEPIRTDPGTGKRYTFFSDPDGL
CCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCC
PLELYEA
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]