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The map label for this gene is yhjL [H]

Identifier: 52787624

GI number: 52787624

Start: 3769888

End: 3771201

Strand: Reverse

Name: yhjL [H]

Synonym: BLi03946

Alternate gene names: 52787624

Gene position: 3771201-3769888 (Counterclockwise)

Preceding gene: 52787626

Following gene: 52787623

Centisome position: 89.31

GC content: 43.38

Gene sequence:

>1314_bases
ATGAAAACCGCAAACGAAAACATGACTTGCACGAGCAAACAGCTATTTGTCCTTCTGAATGATTTGAAGGAAGGAAAGCT
CGCTGGTGAATGCCGTATAGACGACACACTGGCCAATCAAAAATTAAAAGAGACATTGCAGCAGGATCAATTCGACATAA
CCGCCAATTTGCTGAACAGAATGGATTCCCCGCCCTCCAGAGTTGACTTTATGCCGCTTCATCGACTGATCACAGAAGAA
GAAGTAGATGACGTGGTTCATGCGGTGAAAGACGTGCTGCCGACCGGGCAATTTACAAGCGGTTTTTATGTTGGCGTATT
TGAAGCTGAAATAGCTGCTTTTTTGAGCAAAAAGCATGTCATGGCTTCATCCAGCGGAACCGATGCCATGATTGTCGCGC
TGAAGGCTGCGGGTGTTGGACAAGGTGATGAAGTCATTATGCCTGCAAACAGCTTTGCTGCAACGGAAAACGCCGTGCTC
GCAGCTGGAGGCACTCCGATTTTCTGCGATATTGACCCTGTTACATTTTGCATGGATCCTTCAGAAATTGAAGCATGTGT
CACTTTGAAAACGAAATGCATTTTGCCTGTACACCTTTATGGAAAGCTGCCTGACATGGAAGCCATTGCAAAAACCGCTG
ATAAATACGGCATCCCGATTATTGAAGACGCCTGCCAGGCGATCGGCGTTTCCGATCTGGGAAAAAACAGCCTTTGCTCC
ATATTAAGCTTCAATCCGTATAAAAATCTCGGCACTTGCGGAAAAGCCGGCGCAATTGTGACGGATGATCCATCATTTGC
ATCCGCATGCATGGAATATATGTATCACGGCTTTGAACTGAATCAAAAAAATAAAAAGGCGGCTGACTACGGCTTTAACG
CTAAGATTGATAATCTGCAAGCCGCTATTGGACTGGCAAGGATGAAATATCTTTCTTTAAATAATCTGAAGCGCTTATAT
TTAGCAGATCGTTATATTGCGCATTTGCAGCAGTATGAAGACAGAGGTCTGATCAAATTGCCTCAAATGACCGATGATCA
TGTATGGCATTTGTTTACAATTAAAATACTAAACGGAAATCGTGACCAAGTCAAAGATATGATGCTTAAATTTCATAATG
TCCAAACAGATATATACTACCCGATTTTATCCCATCATCAAAACACACCACTTGTAAAAGCCAATTATCGGCACACATCA
CTGCCGGTCACTGAATCAGTGCATAAACAAATGCTTCAGCTTCCTCTCTATCCGGGGCTCACCGTAGAAGAACAAGACAA
AGTAATGGAGGCCTTAATTGATGTCGTATCATGA

Upstream 100 bases:

>100_bases
ACTTCCTGAAAAAAAGAGTTGTTATGGTATCGATTCCATCATTTAAGATATGTCATGAAATATGACAATTTCCCAAAATA
ATAAAAATGGGGTGAAATTG

Downstream 100 bases:

>100_bases
AACACTTTCTTTTCACACCTTGCAGCAAGTAAACAAGCCGAAGTACGCCGTATTTTGCGATTTTGATGAGACATATTTCG
CCCACAGCATCACCGATGAA

Product: YhjL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKTANENMTCTSKQLFVLLNDLKEGKLAGECRIDDTLANQKLKETLQQDQFDITANLLNRMDSPPSRVDFMPLHRLITEE
EVDDVVHAVKDVLPTGQFTSGFYVGVFEAEIAAFLSKKHVMASSSGTDAMIVALKAAGVGQGDEVIMPANSFAATENAVL
AAGGTPIFCDIDPVTFCMDPSEIEACVTLKTKCILPVHLYGKLPDMEAIAKTADKYGIPIIEDACQAIGVSDLGKNSLCS
ILSFNPYKNLGTCGKAGAIVTDDPSFASACMEYMYHGFELNQKNKKAADYGFNAKIDNLQAAIGLARMKYLSLNNLKRLY
LADRYIAHLQQYEDRGLIKLPQMTDDHVWHLFTIKILNGNRDQVKDMMLKFHNVQTDIYYPILSHHQNTPLVKANYRHTS
LPVTESVHKQMLQLPLYPGLTVEEQDKVMEALIDVVS

Sequences:

>Translated_437_residues
MKTANENMTCTSKQLFVLLNDLKEGKLAGECRIDDTLANQKLKETLQQDQFDITANLLNRMDSPPSRVDFMPLHRLITEE
EVDDVVHAVKDVLPTGQFTSGFYVGVFEAEIAAFLSKKHVMASSSGTDAMIVALKAAGVGQGDEVIMPANSFAATENAVL
AAGGTPIFCDIDPVTFCMDPSEIEACVTLKTKCILPVHLYGKLPDMEAIAKTADKYGIPIIEDACQAIGVSDLGKNSLCS
ILSFNPYKNLGTCGKAGAIVTDDPSFASACMEYMYHGFELNQKNKKAADYGFNAKIDNLQAAIGLARMKYLSLNNLKRLY
LADRYIAHLQQYEDRGLIKLPQMTDDHVWHLFTIKILNGNRDQVKDMMLKFHNVQTDIYYPILSHHQNTPLVKANYRHTS
LPVTESVHKQMLQLPLYPGLTVEEQDKVMEALIDVVS
>Mature_437_residues
MKTANENMTCTSKQLFVLLNDLKEGKLAGECRIDDTLANQKLKETLQQDQFDITANLLNRMDSPPSRVDFMPLHRLITEE
EVDDVVHAVKDVLPTGQFTSGFYVGVFEAEIAAFLSKKHVMASSSGTDAMIVALKAAGVGQGDEVIMPANSFAATENAVL
AAGGTPIFCDIDPVTFCMDPSEIEACVTLKTKCILPVHLYGKLPDMEAIAKTADKYGIPIIEDACQAIGVSDLGKNSLCS
ILSFNPYKNLGTCGKAGAIVTDDPSFASACMEYMYHGFELNQKNKKAADYGFNAKIDNLQAAIGLARMKYLSLNNLKRLY
LADRYIAHLQQYEDRGLIKLPQMTDDHVWHLFTIKILNGNRDQVKDMMLKFHNVQTDIYYPILSHHQNTPLVKANYRHTS
LPVTESVHKQMLQLPLYPGLTVEEQDKVMEALIDVVS

Specific function: Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=382, Percent_Identity=30.6282722513089, Blast_Score=165, Evalue=6e-42,
Organism=Escherichia coli, GI2367285, Length=331, Percent_Identity=28.3987915407855, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 48420; Mature: 48420

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTANENMTCTSKQLFVLLNDLKEGKLAGECRIDDTLANQKLKETLQQDQFDITANLLNR
CCCCCCCCEECHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHHH
MDSPPSRVDFMPLHRLITEEEVDDVVHAVKDVLPTGQFTSGFYVGVFEAEIAAFLSKKHV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHH
MASSSGTDAMIVALKAAGVGQGDEVIMPANSFAATENAVLAAGGTPIFCDIDPVTFCMDP
EECCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCEEEECCCEEEEECCCEEEECCH
SEIEACVTLKTKCILPVHLYGKLPDMEAIAKTADKYGIPIIEDACQAIGVSDLGKNSLCS
HHHHEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHH
ILSFNPYKNLGTCGKAGAIVTDDPSFASACMEYMYHGFELNQKNKKAADYGFNAKIDNLQ
HHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEECCCCCCHHCCCCCCCHHHHH
AAIGLARMKYLSLNNLKRLYLADRYIAHLQQYEDRGLIKLPQMTDDHVWHLFTIKILNGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEEEEECCC
RDQVKDMMLKFHNVQTDIYYPILSHHQNTPLVKANYRHTSLPVTESVHKQMLQLPLYPGL
HHHHHHHHHHHHCCCHHEEHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCC
TVEEQDKVMEALIDVVS
CCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MKTANENMTCTSKQLFVLLNDLKEGKLAGECRIDDTLANQKLKETLQQDQFDITANLLNR
CCCCCCCCEECHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHHH
MDSPPSRVDFMPLHRLITEEEVDDVVHAVKDVLPTGQFTSGFYVGVFEAEIAAFLSKKHV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHH
MASSSGTDAMIVALKAAGVGQGDEVIMPANSFAATENAVLAAGGTPIFCDIDPVTFCMDP
EECCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCEEEECCCEEEEECCCEEEECCH
SEIEACVTLKTKCILPVHLYGKLPDMEAIAKTADKYGIPIIEDACQAIGVSDLGKNSLCS
HHHHEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHH
ILSFNPYKNLGTCGKAGAIVTDDPSFASACMEYMYHGFELNQKNKKAADYGFNAKIDNLQ
HHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEECCCCCCHHCCCCCCCHHHHH
AAIGLARMKYLSLNNLKRLYLADRYIAHLQQYEDRGLIKLPQMTDDHVWHLFTIKILNGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEEEEECCC
RDQVKDMMLKFHNVQTDIYYPILSHHQNTPLVKANYRHTSLPVTESVHKQMLQLPLYPGL
HHHHHHHHHHHHCCCHHEEHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCC
TVEEQDKVMEALIDVVS
CCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]