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The map label for this gene is ywmC [H]

Identifier: 52787598

GI number: 52787598

Start: 3746925

End: 3747611

Strand: Reverse

Name: ywmC [H]

Synonym: BLi03920

Alternate gene names: 52787598

Gene position: 3747611-3746925 (Counterclockwise)

Preceding gene: 52787599

Following gene: 52787597

Centisome position: 88.75

GC content: 47.16

Gene sequence:

>687_bases
ATGAAGAAGAAGATGACATTGGGCATTTTGACCGCTATGGTTCTCAGTCTTGGTTCGCCTGCTTTTGCAGCTGAGAAAAA
ACAGGAGGTAACAGTTGCCGAAGATGCGCCCAACGTTGCGATTATGCTTGATGCAAGCGGCAGCATGGCTAAAAAGATCG
GCGGGGTCTCAAAATACGAGCTTGCCAAAAATGAAGCGTTCAGCTTTGGTTCCAAGCTTGAAAATGCAAACGTGCTCATG
AGAGTTTTCGGTTCAGAGGGAAACAATAAAAATTCCGGAAAAGTGCAGTCCTGCAATGCAATCAGAGGGGTGTACGGCTT
CCAAACGTATGACGAGCAAAGCTTCCGCAATTCCTTAAACGGCATCGGACCGACCGGATGGACACCGATCGCAAACGCGC
TGCAAGATGCAAAAAACGCGCTTGACCAGCTGGACAACAACGGGAAAAACGTCGTCTATCTGCTGACAGACGGTGAGGAA
ACATGCGGAGGCAATCCGGTAAAAGTCGCAACAGAACTGCGCAAATCCAATGCGGTTGTCAACGTGATCGGCTTTGATTA
TGAAGGAGACTTCCACGGACAATTGACCAGTATCGCAGCAGCTGGCGGCGGTGAATATTTCCAGGCAAAAACTAAAAATG
ACATCAAAAGAATTTTTACTCAGGAAGCAATTGAGCTTTCTAAATAA

Upstream 100 bases:

>100_bases
ATAACGAGGAAAAGGAGACATGCCCTATTTATTTCTCCCTGGTGTTCTTCTACGATAATAATGTGTTAACGACTTTATTT
CAGAAAGGGGAAAGGGAGAA

Downstream 100 bases:

>100_bases
ACTGGAAAAAAGCTGTGGACATGTTTCCGCAGCTTTCCTTTTGTGATGAAAAGATTGTCAAAAGTCAAGAAAAATACTTT
ACAAATATTAAGTTATTGTG

Product: YwmC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKKKMTLGILTAMVLSLGSPAFAAEKKQEVTVAEDAPNVAIMLDASGSMAKKIGGVSKYELAKNEAFSFGSKLENANVLM
RVFGSEGNNKNSGKVQSCNAIRGVYGFQTYDEQSFRNSLNGIGPTGWTPIANALQDAKNALDQLDNNGKNVVYLLTDGEE
TCGGNPVKVATELRKSNAVVNVIGFDYEGDFHGQLTSIAAAGGGEYFQAKTKNDIKRIFTQEAIELSK

Sequences:

>Translated_228_residues
MKKKMTLGILTAMVLSLGSPAFAAEKKQEVTVAEDAPNVAIMLDASGSMAKKIGGVSKYELAKNEAFSFGSKLENANVLM
RVFGSEGNNKNSGKVQSCNAIRGVYGFQTYDEQSFRNSLNGIGPTGWTPIANALQDAKNALDQLDNNGKNVVYLLTDGEE
TCGGNPVKVATELRKSNAVVNVIGFDYEGDFHGQLTSIAAAGGGEYFQAKTKNDIKRIFTQEAIELSK
>Mature_228_residues
MKKKMTLGILTAMVLSLGSPAFAAEKKQEVTVAEDAPNVAIMLDASGSMAKKIGGVSKYELAKNEAFSFGSKLENANVLM
RVFGSEGNNKNSGKVQSCNAIRGVYGFQTYDEQSFRNSLNGIGPTGWTPIANALQDAKNALDQLDNNGKNVVYLLTDGEE
TCGGNPVKVATELRKSNAVVNVIGFDYEGDFHGQLTSIAAAGGGEYFQAKTKNDIKRIFTQEAIELSK

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywmD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 24374; Mature: 24374

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKMTLGILTAMVLSLGSPAFAAEKKQEVTVAEDAPNVAIMLDASGSMAKKIGGVSKYE
CCCCHHHHHHHHHHHHCCCCCHHCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCHHH
LAKNEAFSFGSKLENANVLMRVFGSEGNNKNSGKVQSCNAIRGVYGFQTYDEQSFRNSLN
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCHHHHHHHCCCCCCHHHHHHHHC
GIGPTGWTPIANALQDAKNALDQLDNNGKNVVYLLTDGEETCGGNPVKVATELRKSNAVV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEE
NVIGFDYEGDFHGQLTSIAAAGGGEYFQAKTKNDIKRIFTQEAIELSK
EEEEECCCCCCCCHHHEEEECCCCCEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKMTLGILTAMVLSLGSPAFAAEKKQEVTVAEDAPNVAIMLDASGSMAKKIGGVSKYE
CCCCHHHHHHHHHHHHCCCCCHHCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCHHH
LAKNEAFSFGSKLENANVLMRVFGSEGNNKNSGKVQSCNAIRGVYGFQTYDEQSFRNSLN
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCHHHHHHHCCCCCCHHHHHHHHC
GIGPTGWTPIANALQDAKNALDQLDNNGKNVVYLLTDGEETCGGNPVKVATELRKSNAVV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEE
NVIGFDYEGDFHGQLTSIAAAGGGEYFQAKTKNDIKRIFTQEAIELSK
EEEEECCCCCCCCHHHEEEECCCCCEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]