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The map label for this gene is ywnF [H]

Identifier: 52787572

GI number: 52787572

Start: 3714278

End: 3714721

Strand: Reverse

Name: ywnF [H]

Synonym: BLi03894

Alternate gene names: 52787572

Gene position: 3714721-3714278 (Counterclockwise)

Preceding gene: 52787574

Following gene: 52787570

Centisome position: 87.97

GC content: 45.5

Gene sequence:

>444_bases
ATGGATATGGAACGTTTCCATCAAATGCCGGCCTTTATGAAAGAGGAAATGGATAACCTCAAGCGCGTGGCGGCGCCGTT
CTTAAAGAAAAGGCTGATTTTTCTTTTTATCGCGATTCCGCTGCTTCTTGCTTCATTTGTTTATCTTTCCTCTTTTTGGG
GGCAGGCAGCTTATGGAACCGATTCAATGATAAAAATCGGCTGCGCTGCCGCAGGTGCAGCATTCGGCATGGCGCTGTTC
AGAGAGTCGTCATACCAAAAAAGAAATGTTCAGCAATCGGTGATGAAGTATATATTGGAACGGATGCAAACAAGCGAAGT
GCTTTCCGATGAACGGAAAAGCCGCTACGTTCGGGCGGTCAAAGAAGAGCCGTTTACTGTAATGAGAAGCTTTTTGGAAT
TTTTAAATGAAGAAGAGATCAGAAGGCGCAGGCTGGCTGAATGA

Upstream 100 bases:

>100_bases
AACTGTAAAACATGTTGGATCTAAGTTACGATATACATATAAAAAGCGTGATTTAATTAGCGGACCAACGCCTCTTTAAC
CAAAACGGGAGGGATTGATT

Downstream 100 bases:

>100_bases
TTGATGGAAAAAAGAGCTGCATGACAGCTCTTTTTTTGTCATGATGATCAGGCTTCATTCAATTCTTTTCCTAATATTTT
TAAGTCGTACCGGATTCCGT

Product: YwnF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MDMERFHQMPAFMKEEMDNLKRVAAPFLKKRLIFLFIAIPLLLASFVYLSSFWGQAAYGTDSMIKIGCAAAGAAFGMALF
RESSYQKRNVQQSVMKYILERMQTSEVLSDERKSRYVRAVKEEPFTVMRSFLEFLNEEEIRRRRLAE

Sequences:

>Translated_147_residues
MDMERFHQMPAFMKEEMDNLKRVAAPFLKKRLIFLFIAIPLLLASFVYLSSFWGQAAYGTDSMIKIGCAAAGAAFGMALF
RESSYQKRNVQQSVMKYILERMQTSEVLSDERKSRYVRAVKEEPFTVMRSFLEFLNEEEIRRRRLAE
>Mature_147_residues
MDMERFHQMPAFMKEEMDNLKRVAAPFLKKRLIFLFIAIPLLLASFVYLSSFWGQAAYGTDSMIKIGCAAAGAAFGMALF
RESSYQKRNVQQSVMKYILERMQTSEVLSDERKSRYVRAVKEEPFTVMRSFLEFLNEEEIRRRRLAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020205
- ProDom:   PD087515 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17228; Mature: 17228

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00606 B_KETOACYL_SYNTHASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMERFHQMPAFMKEEMDNLKRVAAPFLKKRLIFLFIAIPLLLASFVYLSSFWGQAAYGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSMIKIGCAAAGAAFGMALFRESSYQKRNVQQSVMKYILERMQTSEVLSDERKSRYVRAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEEPFTVMRSFLEFLNEEEIRRRRLAE
HCCCHHHHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure
MDMERFHQMPAFMKEEMDNLKRVAAPFLKKRLIFLFIAIPLLLASFVYLSSFWGQAAYGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSMIKIGCAAAGAAFGMALFRESSYQKRNVQQSVMKYILERMQTSEVLSDERKSRYVRAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEEPFTVMRSFLEFLNEEEIRRRRLAE
HCCCHHHHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]