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The map label for this gene is yfiV [H]

Identifier: 52787429

GI number: 52787429

Start: 3568441

End: 3568920

Strand: Direct

Name: yfiV [H]

Synonym: BLi03747

Alternate gene names: 52787429

Gene position: 3568441-3568920 (Clockwise)

Preceding gene: 52787423

Following gene: 52787430

Centisome position: 84.51

GC content: 43.54

Gene sequence:

>480_bases
TTGAAATACAATATTCATGATACAACCGTGCTGAACGAAGACATTTTGACACCGGAAGAAAAAGAGACATGGGTTCTTTA
TATGAAAGTACTGACTGCTGCCGGCTTGGGGGATGTCTCCGAATGGATGAAGCTCGATCTCAGCATGCCGCAAATGAAGG
TTTTAATGCTTCTGAACAACCACGGCACACTGAAAGTCTCAGAAATCGCCGAAAAAATGGGAGCTTCCCTTTCGAATATG
ACCGGACTGCTCAGCCGCCTTGAACAGGCGAACTTTATCAAAAGAACACATTCCGAGCAAGACCGGCGAACGATTGTGGT
TGAATTAACCGAAGATGCGAAGGGGATTTTTCGGAGCCTTTACAAAAAAGGGCATGAAAAGCTCAAAAGAGCGCTTCAGA
AGCTGAATGAACAGGAAAAAAACAAAGTGAATGAAGGCCTTACAATTCTTGAAAAAGCGTTAAAAGCCGATGATGAATAG

Upstream 100 bases:

>100_bases
TTTTGAAAATGGCCCCCTTGACACTTCGATGAAGTGCTTTCTTTCAAAGCGAAAAATCAGTAGTATGTAAAGAGGAACGC
GAAAAGGAAGTGAAGAACCG

Downstream 100 bases:

>100_bases
ACAAGCTGCCCGGAAACCGGTGCAGCTTTTTTTGTTGAAAAATTTCTTTTGACAAAACGTGCTTTTTTAAGGATGATAAA
AATAATTCATTCAAAGTGAA

Product: YfiV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKYNIHDTTVLNEDILTPEEKETWVLYMKVLTAAGLGDVSEWMKLDLSMPQMKVLMLLNNHGTLKVSEIAEKMGASLSNM
TGLLSRLEQANFIKRTHSEQDRRTIVVELTEDAKGIFRSLYKKGHEKLKRALQKLNEQEKNKVNEGLTILEKALKADDE

Sequences:

>Translated_159_residues
MKYNIHDTTVLNEDILTPEEKETWVLYMKVLTAAGLGDVSEWMKLDLSMPQMKVLMLLNNHGTLKVSEIAEKMGASLSNM
TGLLSRLEQANFIKRTHSEQDRRTIVVELTEDAKGIFRSLYKKGHEKLKRALQKLNEQEKNKVNEGLTILEKALKADDE
>Mature_159_residues
MKYNIHDTTVLNEDILTPEEKETWVLYMKVLTAAGLGDVSEWMKLDLSMPQMKVLMLLNNHGTLKVSEIAEKMGASLSNM
TGLLSRLEQANFIKRTHSEQDRRTIVVELTEDAKGIFRSLYKKGHEKLKRALQKLNEQEKNKVNEGLTILEKALKADDE

Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18186; Mature: 18186

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNIHDTTVLNEDILTPEEKETWVLYMKVLTAAGLGDVSEWMKLDLSMPQMKVLMLLNN
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCC
HGTLKVSEIAEKMGASLSNMTGLLSRLEQANFIKRTHSEQDRRTIVVELTEDAKGIFRSL
CCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHH
YKKGHEKLKRALQKLNEQEKNKVNEGLTILEKALKADDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYNIHDTTVLNEDILTPEEKETWVLYMKVLTAAGLGDVSEWMKLDLSMPQMKVLMLLNN
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCC
HGTLKVSEIAEKMGASLSNMTGLLSRLEQANFIKRTHSEQDRRTIVVELTEDAKGIFRSL
CCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHH
YKKGHEKLKRALQKLNEQEKNKVNEGLTILEKALKADDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]