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The map label for this gene is 52787306

Identifier: 52787306

GI number: 52787306

Start: 3453044

End: 3453559

Strand: Reverse

Name: 52787306

Synonym: BLi03619

Alternate gene names: NA

Gene position: 3453559-3453044 (Counterclockwise)

Preceding gene: 52787308

Following gene: 52787305

Centisome position: 81.79

GC content: 42.83

Gene sequence:

>516_bases
ATGCCGAGACCTGCAAAATCCGCAGCCCTTCAATTAATACAGGGCAATCCAAATAAAAAGAATACGAAAGAGCTTGCAGC
CAGGGCCAAACATGAAAAAAAGTTGAAAATGCGCTCTGAAAATATCAAACCGCCTACCTGGCTGGATAAGGTGGCTAAAA
AAGAATTTAAGCGGATTGCTGCTTTATTATCTGAGGTGGAAATTATGACGGAGGCGGATATCAGCATGTTAGCCGCCTAT
TGTAATGCCTATTCTCAGTACATTTCTATTACAAAAATTATTGAGGAAGACGGCATCATGATTCATACAGAGGGTCAAGG
TGAAAACGGGAAGCCGGTCAAGTTGATTGGAGAAGAGCATCCCCTACTGAAACGACAGAAAAACTTCTATGATCAAATGA
AATCGGCTGCTAATGATTTCGGACTCACACCGTCTGCACGTGCCAAGCTCGCGATCACGAAAACCCAGGAAGAACGGGAG
AAGACTTTAGCAGAAAAGGAGTTTAGTAATGTATGA

Upstream 100 bases:

>100_bases
CTTGATATGACTGGTTTTGTTGTCACCTTCATCATAGCATGCTTGGTGAAAAAAACAAGCGAAAAATTGCAATTTTTTTA
ATAGAAATGAGGTGAAAAAC

Downstream 100 bases:

>100_bases
ATACAATTAAACAGTTTATGATTGATTACTCGCGCGATGTGATATCGGGCGAGATTGTTGCGTGCGAAAAGCATATATGG
GCTTGTCAGCGGTTTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: P27 Family Phage Terminase Small Subunit; Phage Terminase-Like Protein Small Subunit; Phage Terminase; Phage Terminase Small Subunit P; Phage Terminase Like Small Subunit Protein; PhiRv1 Phage Protein; Bacteriophage Terminase Small Subunit; Phage Terminasesmall Subunit

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MPRPAKSAALQLIQGNPNKKNTKELAARAKHEKKLKMRSENIKPPTWLDKVAKKEFKRIAALLSEVEIMTEADISMLAAY
CNAYSQYISITKIIEEDGIMIHTEGQGENGKPVKLIGEEHPLLKRQKNFYDQMKSAANDFGLTPSARAKLAITKTQEERE
KTLAEKEFSNV

Sequences:

>Translated_171_residues
MPRPAKSAALQLIQGNPNKKNTKELAARAKHEKKLKMRSENIKPPTWLDKVAKKEFKRIAALLSEVEIMTEADISMLAAY
CNAYSQYISITKIIEEDGIMIHTEGQGENGKPVKLIGEEHPLLKRQKNFYDQMKSAANDFGLTPSARAKLAITKTQEERE
KTLAEKEFSNV
>Mature_170_residues
PRPAKSAALQLIQGNPNKKNTKELAARAKHEKKLKMRSENIKPPTWLDKVAKKEFKRIAALLSEVEIMTEADISMLAAYC
NAYSQYISITKIIEEDGIMIHTEGQGENGKPVKLIGEEHPLLKRQKNFYDQMKSAANDFGLTPSARAKLAITKTQEEREK
TLAEKEFSNV

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19285; Mature: 19153

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPAKSAALQLIQGNPNKKNTKELAARAKHEKKLKMRSENIKPPTWLDKVAKKEFKRIA
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ALLSEVEIMTEADISMLAAYCNAYSQYISITKIIEEDGIMIHTEGQGENGKPVKLIGEEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC
PLLKRQKNFYDQMKSAANDFGLTPSARAKLAITKTQEEREKTLAEKEFSNV
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRPAKSAALQLIQGNPNKKNTKELAARAKHEKKLKMRSENIKPPTWLDKVAKKEFKRIA
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ALLSEVEIMTEADISMLAAYCNAYSQYISITKIIEEDGIMIHTEGQGENGKPVKLIGEEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC
PLLKRQKNFYDQMKSAANDFGLTPSARAKLAITKTQEEREKTLAEKEFSNV
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA