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The map label for this gene is ymfO [C]

Identifier: 52787303

GI number: 52787303

Start: 3449824

End: 3451134

Strand: Reverse

Name: ymfO [C]

Synonym: BLi03616

Alternate gene names: 52787303

Gene position: 3451134-3449824 (Counterclockwise)

Preceding gene: 52787304

Following gene: 52787302

Centisome position: 81.73

GC content: 41.42

Gene sequence:

>1311_bases
ATGCTATTAAGCCGTTTAAAGAGCGGAATAAAAAATGAAATTGCTGAAGAGGATAGCGGTTCCCTTCTCCATCCGGTTGA
TTGGTTCAAAAATATTTTTGCTGGATCTGAAAGCGCATCTGGTGAAAGGGTATCAACAAAAACGGCCGTTCTTCATCCGG
ATGTATATGCCTGTGTGATTGTTTTGGCGGATGATATTGCGAAACTGCCGATTAAACTTTTTCAGAATCAAAATGGAAAC
ATACAACAGGTTCAAAATAAAGTCAGCGATATCATTCTGAACAAAGTCAATGACTATATGACAAGCTTTGTGTGGAAGCG
GCTTTTGGTTACAAGGCTTTGCACTTGGGGAAACAGCTACAACCTTTTACTTTTTGATAAAGACGGAAATGTGACGGGTA
TCAGACCATTGGATCCGGAAGCAACCAACACAAATATTGATCCCGATAACGGGCGTGTTTGGTACTCCACAACGATTGAC
GGCAGATACCGTGAGTTTTTTTATGAAGAGGTGCTGCATTTTAAAAACCTGTCTCTTGACGGAATTGTGGGGCAAACTCC
GATTTCAGTTATTCGGGACAATATAGGGTCAAATAGAGCTGCCACAAAATTCAACGCGAAATTTTACAAGAATGGCGGTG
CACCGTTCGGTGTTGTTAAAGCGCCGACCCTTTTAGATCGAAAAAGTAAACAAATTCTTAGAGAAGACTGGGAGCGGGTG
AATGCGGGGCAGTCTATTGCAGTTTTAGACGCCGGGCTTGATTATTCACAGGTAACCATGCCTATGAAAGATGCCCAATT
TATTGAATCGATGAAATGGAATCGCCAACAGATTGCATCGATTTATAAGGTGCCTCCGCATAAAATAGGTGAGCTGGACA
GGGCAACATTTTCAAATATTGAGCAACAATCCTTAGATTATGTCAAAACCACTTTACAGCCAATCGTCACAAATATTGAA
CAAGAGTTAAACGATAAGGTTTTGACAGAGAAGCAGCAGGGAGCTGGCTATTACTTTAAATTTAACCTGGAATCAGAGCT
TCGCGGGGATAGTAAATCACGTGCTGAATTTTATAAAACGATGCAAAGCGTAGGCGCCTTTAGCGTCAATACTATTCTTC
AAAAAGAGGACATGACAGGTATCGGGGAGATCGGCGATGAGCATTATGGAAACTTAAACCTTGTTCCCCTTTCAATTATG
AAAGAGTATCAACTTAGCAAGGTCAAACGGTCTTCAAATCGCCTGAAAGGGGGTGATGGCAACGGAACAGAAGAAGAAAA
ACAAGTATTGGAACATGAAGGTTCTGAATGA

Upstream 100 bases:

>100_bases
CGTAAACGCGGGTTTAATCGCAACCGGTGTTTTTTTATTTTCTCTTGCCAGCTTGGCAGGATTTGTTCGTCAAAAAAATA
AGGATGAGGGAGGGAAATAG

Downstream 100 bases:

>100_bases
TTCGACTGCTGAAATCACGCTTTACGGTTCTATTACTGGCGAAGGATGGTTTAGCGAGAGCTCGTCCAAGGCCTTTCAGG
CTGAGTTGAAAAGTTTAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: HK97 Family Phage Portal Protein; Portal Protein; Phage Portal Protein HK; Head Portal Protein; HK97 Family Portal Protein; Phage-Related Portal Protein; Phage-Related Head Portal Protein; Phage-Related Protein; HK97 Family Portal Protein ; Phage Capsid Protein HK; Portal V; OrfH-Like Protein; Phage Related Head Portal Protein; Prophage Lp3 Portal Protein; Phage Portal; Prophage; Phage-Like Protein; Bacteriophage Portal Protein; Protein RF

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MLLSRLKSGIKNEIAEEDSGSLLHPVDWFKNIFAGSESASGERVSTKTAVLHPDVYACVIVLADDIAKLPIKLFQNQNGN
IQQVQNKVSDIILNKVNDYMTSFVWKRLLVTRLCTWGNSYNLLLFDKDGNVTGIRPLDPEATNTNIDPDNGRVWYSTTID
GRYREFFYEEVLHFKNLSLDGIVGQTPISVIRDNIGSNRAATKFNAKFYKNGGAPFGVVKAPTLLDRKSKQILREDWERV
NAGQSIAVLDAGLDYSQVTMPMKDAQFIESMKWNRQQIASIYKVPPHKIGELDRATFSNIEQQSLDYVKTTLQPIVTNIE
QELNDKVLTEKQQGAGYYFKFNLESELRGDSKSRAEFYKTMQSVGAFSVNTILQKEDMTGIGEIGDEHYGNLNLVPLSIM
KEYQLSKVKRSSNRLKGGDGNGTEEEKQVLEHEGSE

Sequences:

>Translated_436_residues
MLLSRLKSGIKNEIAEEDSGSLLHPVDWFKNIFAGSESASGERVSTKTAVLHPDVYACVIVLADDIAKLPIKLFQNQNGN
IQQVQNKVSDIILNKVNDYMTSFVWKRLLVTRLCTWGNSYNLLLFDKDGNVTGIRPLDPEATNTNIDPDNGRVWYSTTID
GRYREFFYEEVLHFKNLSLDGIVGQTPISVIRDNIGSNRAATKFNAKFYKNGGAPFGVVKAPTLLDRKSKQILREDWERV
NAGQSIAVLDAGLDYSQVTMPMKDAQFIESMKWNRQQIASIYKVPPHKIGELDRATFSNIEQQSLDYVKTTLQPIVTNIE
QELNDKVLTEKQQGAGYYFKFNLESELRGDSKSRAEFYKTMQSVGAFSVNTILQKEDMTGIGEIGDEHYGNLNLVPLSIM
KEYQLSKVKRSSNRLKGGDGNGTEEEKQVLEHEGSE
>Mature_436_residues
MLLSRLKSGIKNEIAEEDSGSLLHPVDWFKNIFAGSESASGERVSTKTAVLHPDVYACVIVLADDIAKLPIKLFQNQNGN
IQQVQNKVSDIILNKVNDYMTSFVWKRLLVTRLCTWGNSYNLLLFDKDGNVTGIRPLDPEATNTNIDPDNGRVWYSTTID
GRYREFFYEEVLHFKNLSLDGIVGQTPISVIRDNIGSNRAATKFNAKFYKNGGAPFGVVKAPTLLDRKSKQILREDWERV
NAGQSIAVLDAGLDYSQVTMPMKDAQFIESMKWNRQQIASIYKVPPHKIGELDRATFSNIEQQSLDYVKTTLQPIVTNIE
QELNDKVLTEKQQGAGYYFKFNLESELRGDSKSRAEFYKTMQSVGAFSVNTILQKEDMTGIGEIGDEHYGNLNLVPLSIM
KEYQLSKVKRSSNRLKGGDGNGTEEEKQVLEHEGSE

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49114; Mature: 49114

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSRLKSGIKNEIAEEDSGSLLHPVDWFKNIFAGSESASGERVSTKTAVLHPDVYACVI
CCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHCCCCCCCCCEEECCEEEECCHHHHHHH
VLADDIAKLPIKLFQNQNGNIQQVQNKVSDIILNKVNDYMTSFVWKRLLVTRLCTWGNSY
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NLLLFDKDGNVTGIRPLDPEATNTNIDPDNGRVWYSTTIDGRYREFFYEEVLHFKNLSLD
EEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCC
GIVGQTPISVIRDNIGSNRAATKFNAKFYKNGGAPFGVVKAPTLLDRKSKQILREDWERV
CCCCCCHHHHHHHCCCCCCCCEEECCHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NAGQSIAVLDAGLDYSQVTMPMKDAQFIESMKWNRQQIASIYKVPPHKIGELDRATFSNI
CCCCEEEEEECCCCHHHEECCCHHHHHHHHHCCCHHHHHHHHCCCCHHHCCHHHHHHHHH
EQQSLDYVKTTLQPIVTNIEQELNDKVLTEKQQGAGYYFKFNLESELRGDSKSRAEFYKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHH
MQSVGAFSVNTILQKEDMTGIGEIGDEHYGNLNLVPLSIMKEYQLSKVKRSSNRLKGGDG
HHHHCCHHHHHHHHHCCCCCCHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCC
NGTEEEKQVLEHEGSE
CCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLLSRLKSGIKNEIAEEDSGSLLHPVDWFKNIFAGSESASGERVSTKTAVLHPDVYACVI
CCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHCCCCCCCCCEEECCEEEECCHHHHHHH
VLADDIAKLPIKLFQNQNGNIQQVQNKVSDIILNKVNDYMTSFVWKRLLVTRLCTWGNSY
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NLLLFDKDGNVTGIRPLDPEATNTNIDPDNGRVWYSTTIDGRYREFFYEEVLHFKNLSLD
EEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCC
GIVGQTPISVIRDNIGSNRAATKFNAKFYKNGGAPFGVVKAPTLLDRKSKQILREDWERV
CCCCCCHHHHHHHCCCCCCCCEEECCHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NAGQSIAVLDAGLDYSQVTMPMKDAQFIESMKWNRQQIASIYKVPPHKIGELDRATFSNI
CCCCEEEEEECCCCHHHEECCCHHHHHHHHHCCCHHHHHHHHCCCCHHHCCHHHHHHHHH
EQQSLDYVKTTLQPIVTNIEQELNDKVLTEKQQGAGYYFKFNLESELRGDSKSRAEFYKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHH
MQSVGAFSVNTILQKEDMTGIGEIGDEHYGNLNLVPLSIMKEYQLSKVKRSSNRLKGGDG
HHHHCCHHHHHHHHHCCCCCCHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCC
NGTEEEKQVLEHEGSE
CCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA