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The map label for this gene is yulC [H]

Identifier: 52787248

GI number: 52787248

Start: 3403303

End: 3404784

Strand: Reverse

Name: yulC [H]

Synonym: BLi03558

Alternate gene names: 52787248

Gene position: 3404784-3403303 (Counterclockwise)

Preceding gene: 52787249

Following gene: 52787247

Centisome position: 80.63

GC content: 52.23

Gene sequence:

>1482_bases
GTGACGATTCTCGCCTTTGATCTTGGTGCGTCGAGCGGCAGAGCTTATGCAGGTCATGTGGACGGCGGTCTGATCAAAGC
GGAGGAAATTCACCGTTTTCCAAATCAGCCCGTTCAGGCGGGAAAACACCTTTATTGGGACATTCTCAGGCTTTATCATG
AAATTAAACAGGGCATTTTAAAGGCGAAAAACGGCTGTGGACGAATCAGCTGCATCGGAATCGATTCATGGGCGGTTGAC
GTCGGTTTTCTCGATCGGAACGGAGAGCTGATGGGGAACCCTTATCATTACCGCGACCCTTACACGGACGGAATAATGAC
GGAGGTGTTGAATGAAATCGGAAAAGAAGAGCTGTTTTCCAGAACCGGTATTCAGCTTTTGCCGTTCAACACCATCTTTC
AGCTCCGGGCGCTGAAAAAAGCGAATTCTCCGCTGTTGGATTACGCGGACACACTATTAATGATTCCTGATTTGCTGCGC
TATTTTTTAACGGGCGAGAAAAAAAGCGAATTTACAAATGCGACGACAACCCAGCTGTTCAACCCGAAAACGTCTGACTG
GGATTGGGAGCTCATCAGCCTTCTGGGGATCCCGGCCAAGATTTTTCCAAAAGATATAGCAAAGCCCGGAAGCGAAGCGG
GGAGGCTGTCGCAATCAGTGTGCGGCGAATTGTCTGTGCCCGCCGTACCGGTGATTGCCGTCGGCGAACATGACACGGCT
TCTGCAGTTGTCGGCATCCCCGCTGAAACGGATGACTTTGCATATTTGATTTGCGGCACCTGGTCGCTGATCGGAACCGA
ACTTGACGCTCCGCTGATGACAAAACAGGCGCTCGATTGGAATTTTACAAATGAGGGCGGTGCCGGCGGCACATTCCGTT
TTTTAAAAAACATTATGGGATTGTGGCTGTTCCAGCGCTGTCAGGCGGATTGGGAAAAAGATGGGATCAGCTATTCGAGC
GCCGAGCTTGTCAAACTTGCCGGACAGTCAGAAGCATTCAGGTCGGCGGTTGACCCGGATGACCCGGTGTTTCTCAATCC
CGTCCATATGCCTGAGGCGATCAGAGAGTACTGCCGTGCAGCAGGGCAGCACGTGCCGGAAACGCCCGGACAGATCATCC
GCTGCGTGCTGGAAAGCCTTGCGTTTAAATACCGGTTCACCTTTGAACGGATTGAAACCTTGACAGGAAAAGAATATGAC
GGACTTCACATGGCGGGCGGAGGGATTCGAAATGAACTGCTCTGCCAATACACGGCGAATGTACTGTCCAGAAATGTATG
GGCTGGACCGTCAGAGGCAAGCGCCATCGGCAACATTGCCGTACAGGCCGTCGCGCTCGACATGTTTTGGGATATTCAGA
GCGCCCGGAAAGCGATCAAGGCTTCCTTTCCTCAAAAAACGTATGTACCGGAAGATACAGAAGCGTGGGAGCGGGCATAC
CGCCGCTATACAAGTCAGATTCTCGGCGCCGCTTCCCGCTGA

Upstream 100 bases:

>100_bases
TGCGGGAGGAAATGAACGTTCCGCCTGATCCGCTCAAGGCTTATGCGGAAAGCGGATATGCGGAAAAAATCCTGGCACGC
GGGAAAGGCGGTGCAAGCTG

Downstream 100 bases:

>100_bases
AAACCTTTCCTGTATCGGAGCCGATGCGCTATCATGAATGTAACAGTGACTTTTACCAAAAAAGGAAGGAAGTAAACGGA
TGCTTGTAGCTGAAAGACAC

Product: YulC

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTILAFDLGASSGRAYAGHVDGGLIKAEEIHRFPNQPVQAGKHLYWDILRLYHEIKQGILKAKNGCGRISCIGIDSWAVD
VGFLDRNGELMGNPYHYRDPYTDGIMTEVLNEIGKEELFSRTGIQLLPFNTIFQLRALKKANSPLLDYADTLLMIPDLLR
YFLTGEKKSEFTNATTTQLFNPKTSDWDWELISLLGIPAKIFPKDIAKPGSEAGRLSQSVCGELSVPAVPVIAVGEHDTA
SAVVGIPAETDDFAYLICGTWSLIGTELDAPLMTKQALDWNFTNEGGAGGTFRFLKNIMGLWLFQRCQADWEKDGISYSS
AELVKLAGQSEAFRSAVDPDDPVFLNPVHMPEAIREYCRAAGQHVPETPGQIIRCVLESLAFKYRFTFERIETLTGKEYD
GLHMAGGGIRNELLCQYTANVLSRNVWAGPSEASAIGNIAVQAVALDMFWDIQSARKAIKASFPQKTYVPEDTEAWERAY
RRYTSQILGAASR

Sequences:

>Translated_493_residues
MTILAFDLGASSGRAYAGHVDGGLIKAEEIHRFPNQPVQAGKHLYWDILRLYHEIKQGILKAKNGCGRISCIGIDSWAVD
VGFLDRNGELMGNPYHYRDPYTDGIMTEVLNEIGKEELFSRTGIQLLPFNTIFQLRALKKANSPLLDYADTLLMIPDLLR
YFLTGEKKSEFTNATTTQLFNPKTSDWDWELISLLGIPAKIFPKDIAKPGSEAGRLSQSVCGELSVPAVPVIAVGEHDTA
SAVVGIPAETDDFAYLICGTWSLIGTELDAPLMTKQALDWNFTNEGGAGGTFRFLKNIMGLWLFQRCQADWEKDGISYSS
AELVKLAGQSEAFRSAVDPDDPVFLNPVHMPEAIREYCRAAGQHVPETPGQIIRCVLESLAFKYRFTFERIETLTGKEYD
GLHMAGGGIRNELLCQYTANVLSRNVWAGPSEASAIGNIAVQAVALDMFWDIQSARKAIKASFPQKTYVPEDTEAWERAY
RRYTSQILGAASR
>Mature_492_residues
TILAFDLGASSGRAYAGHVDGGLIKAEEIHRFPNQPVQAGKHLYWDILRLYHEIKQGILKAKNGCGRISCIGIDSWAVDV
GFLDRNGELMGNPYHYRDPYTDGIMTEVLNEIGKEELFSRTGIQLLPFNTIFQLRALKKANSPLLDYADTLLMIPDLLRY
FLTGEKKSEFTNATTTQLFNPKTSDWDWELISLLGIPAKIFPKDIAKPGSEAGRLSQSVCGELSVPAVPVIAVGEHDTAS
AVVGIPAETDDFAYLICGTWSLIGTELDAPLMTKQALDWNFTNEGGAGGTFRFLKNIMGLWLFQRCQADWEKDGISYSSA
ELVKLAGQSEAFRSAVDPDDPVFLNPVHMPEAIREYCRAAGQHVPETPGQIIRCVLESLAFKYRFTFERIETLTGKEYDG
LHMAGGGIRNELLCQYTANVLSRNVWAGPSEASAIGNIAVQAVALDMFWDIQSARKAIKASFPQKTYVPEDTEAWERAYR
RYTSQILGAASR

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=474, Percent_Identity=37.7637130801688, Blast_Score=323, Evalue=2e-89,
Organism=Escherichia coli, GI1789168, Length=444, Percent_Identity=25.4504504504505, Blast_Score=115, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 54638; Mature: 54507

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILAFDLGASSGRAYAGHVDGGLIKAEEIHRFPNQPVQAGKHLYWDILRLYHEIKQGIL
CEEEEEECCCCCCCEEEECCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KAKNGCGRISCIGIDSWAVDVGFLDRNGELMGNPYHYRDPYTDGIMTEVLNEIGKEELFS
HHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RTGIQLLPFNTIFQLRALKKANSPLLDYADTLLMIPDLLRYFLTGEKKSEFTNATTTQLF
HCCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCC
NPKTSDWDWELISLLGIPAKIFPKDIAKPGSEAGRLSQSVCGELSVPAVPVIAVGEHDTA
CCCCCCCCHHHHHHHCCCHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCC
SAVVGIPAETDDFAYLICGTWSLIGTELDAPLMTKQALDWNFTNEGGAGGTFRFLKNIMG
CEEEECCCCCCCCEEEEEECHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LWLFQRCQADWEKDGISYSSAELVKLAGQSEAFRSAVDPDDPVFLNPVHMPEAIREYCRA
HHHHHHHHCCHHHCCCCCCHHHHHHHCCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHHH
AGQHVPETPGQIIRCVLESLAFKYRFTFERIETLTGKEYDGLHMAGGGIRNELLCQYTAN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHH
VLSRNVWAGPSEASAIGNIAVQAVALDMFWDIQSARKAIKASFPQKTYVPEDTEAWERAY
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
RRYTSQILGAASR
HHHHHHHHHCCCC
>Mature Secondary Structure 
TILAFDLGASSGRAYAGHVDGGLIKAEEIHRFPNQPVQAGKHLYWDILRLYHEIKQGIL
EEEEEECCCCCCCEEEECCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KAKNGCGRISCIGIDSWAVDVGFLDRNGELMGNPYHYRDPYTDGIMTEVLNEIGKEELFS
HHCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RTGIQLLPFNTIFQLRALKKANSPLLDYADTLLMIPDLLRYFLTGEKKSEFTNATTTQLF
HCCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCC
NPKTSDWDWELISLLGIPAKIFPKDIAKPGSEAGRLSQSVCGELSVPAVPVIAVGEHDTA
CCCCCCCCHHHHHHHCCCHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCC
SAVVGIPAETDDFAYLICGTWSLIGTELDAPLMTKQALDWNFTNEGGAGGTFRFLKNIMG
CEEEECCCCCCCCEEEEEECHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LWLFQRCQADWEKDGISYSSAELVKLAGQSEAFRSAVDPDDPVFLNPVHMPEAIREYCRA
HHHHHHHHCCHHHCCCCCCHHHHHHHCCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHHH
AGQHVPETPGQIIRCVLESLAFKYRFTFERIETLTGKEYDGLHMAGGGIRNELLCQYTAN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHH
VLSRNVWAGPSEASAIGNIAVQAVALDMFWDIQSARKAIKASFPQKTYVPEDTEAWERAY
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
RRYTSQILGAASR
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]