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The map label for this gene is yraA [H]

Identifier: 52786992

GI number: 52786992

Start: 3156311

End: 3156835

Strand: Reverse

Name: yraA [H]

Synonym: BLi03294

Alternate gene names: 52786992

Gene position: 3156835-3156311 (Counterclockwise)

Preceding gene: 52786993

Following gene: 52786990

Centisome position: 74.76

GC content: 51.43

Gene sequence:

>525_bases
ATGCGACTGGAAGGCAAGAAAGTGATCGCGCTTGTCAGCGATGAATTCGAAGATTTAGAACTGTGGTATCCAGTTTTGAG
GTTGAAGGAAGAAGGAGCGATCGTACATTTCATTGGTGAAAAAGCGGATCATGAATACAAGGGCAAATACGGAGTGCCCG
CTGTCTCAGATTATGAGCTGAAAAGCGTGAACATTGAGGAATACGACGCCGTTCTGGTTCCGGGAGGCTGGGCGCCTGAC
AAGCTCAGAAGATATCCCGAGGTCCTGGAGATGATTCGGTGGTTCAACGAAAGGAAGAAGCCCATCGGACAAATCTGCCA
TGCCGGCTGGGTGCTGATTTCTGCAGGAATATTGGAAGGCAGGAAGGTTACAAGCACACCGGGGATTAAAGACGATATGG
AAAATGCCGGAGCCATATGGGTGAATGAAGCAGCGGTCGTCGACGGCCATATCGTGTCAAGCCGCCGCCCGCCGGACCTG
CCGATCTATGTCAAAGCCTTTGCCGATCTTTTGGCGCAGTCCTAA

Upstream 100 bases:

>100_bases
GCCCGGGAAAAGCATCTTTTTAAAGGAACGGGGAAGGGTATAAATAGGTTTAAACAGACTATCATCTATCGTACACTGGT
TGTACAGGAAAGGATCAATC

Downstream 100 bases:

>100_bases
AACAGATGAGCCGCCCGTTCATTCGAGCCGGGGCGGCTCATTTGCTACATGTGATCAGCGGGGAAAACGAGACCGATCTG
TTTGCGCGCTTCATCTATGA

Product: YraA

Products: NA

Alternate protein names: Intracellular protease I [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRLEGKKVIALVSDEFEDLELWYPVLRLKEEGAIVHFIGEKADHEYKGKYGVPAVSDYELKSVNIEEYDAVLVPGGWAPD
KLRRYPEVLEMIRWFNERKKPIGQICHAGWVLISAGILEGRKVTSTPGIKDDMENAGAIWVNEAAVVDGHIVSSRRPPDL
PIYVKAFADLLAQS

Sequences:

>Translated_174_residues
MRLEGKKVIALVSDEFEDLELWYPVLRLKEEGAIVHFIGEKADHEYKGKYGVPAVSDYELKSVNIEEYDAVLVPGGWAPD
KLRRYPEVLEMIRWFNERKKPIGQICHAGWVLISAGILEGRKVTSTPGIKDDMENAGAIWVNEAAVVDGHIVSSRRPPDL
PIYVKAFADLLAQS
>Mature_174_residues
MRLEGKKVIALVSDEFEDLELWYPVLRLKEEGAIVHFIGEKADHEYKGKYGVPAVSDYELKSVNIEEYDAVLVPGGWAPD
KLRRYPEVLEMIRWFNERKKPIGQICHAGWVLISAGILEGRKVTSTPGIKDDMENAGAIWVNEAAVVDGHIVSSRRPPDL
PIYVKAFADLLAQS

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=168, Percent_Identity=38.6904761904762, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19560; Mature: 19560

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLEGKKVIALVSDEFEDLELWYPVLRLKEEGAIVHFIGEKADHEYKGKYGVPAVSDYEL
CCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEE
KSVNIEEYDAVLVPGGWAPDKLRRYPEVLEMIRWFNERKKPIGQICHAGWVLISAGILEG
EECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
RKVTSTPGIKDDMENAGAIWVNEAAVVDGHIVSSRRPPDLPIYVKAFADLLAQS
CEECCCCCCCCHHCCCCEEEECCEEEECCEEECCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRLEGKKVIALVSDEFEDLELWYPVLRLKEEGAIVHFIGEKADHEYKGKYGVPAVSDYEL
CCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEE
KSVNIEEYDAVLVPGGWAPDKLRRYPEVLEMIRWFNERKKPIGQICHAGWVLISAGILEG
EECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
RKVTSTPGIKDDMENAGAIWVNEAAVVDGHIVSSRRPPDLPIYVKAFADLLAQS
CEECCCCCCCCHHCCCCEEEECCEEEECCEEECCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]