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The map label for this gene is ytbQ [H]

Identifier: 52786895

GI number: 52786895

Start: 3053527

End: 3054291

Strand: Reverse

Name: ytbQ [H]

Synonym: BLi03170

Alternate gene names: 52786895

Gene position: 3054291-3053527 (Counterclockwise)

Preceding gene: 52786896

Following gene: 52786894

Centisome position: 72.33

GC content: 51.24

Gene sequence:

>765_bases
GTGAAAAAGGTGACGATCGTCGGAGGGAACGGCACGGTCGGCCGCGTATTAGCGGGCGGATTGGCAGGCGAAGGGTATGA
GGTGACAGTGCTGGATTTAAAAGAACCGGATGACAAACAGGCTGTCCGTTTTATCCGGGTGGATGCGACAGATTACAACG
AAGTCGTCAAAAGCATTCCTGCACAGACGAATGCGCTGATCAATCTTTTGGCTGTAAAGCCGTCGGGCGATTTGCTTGAC
CGGCAGGAGTTTGCGAAAATGACGGATATCTTTTTTAAAGCGACATATACGATTTTGCGGGCGGCGGCGGAGCTCGGCGT
GCCGAAAGTGGTATTTGCCAGCAGCAACCATGTGACAGATGTATATGAAAAGGGCGGCGATTCTCTGTTGGGGAGGCAGA
TCAACACAAATGACTACCCGCAGTCCAAAAGCTTGTACGGCTTGCTAAAATTGGCGTCCGAAAATCTCGGCTACCTTTTC
TCGCACCAATTAGACGCCAAGGTTTCCGTCATCAATCTGCGGATCGGGACAGCTGCTGAAAATGAGCTAGAAACGCTGCA
CGCAAAACCGAGAAGCAAAAAAACGCTTTTATCCCACCCCGACCTCATCGGAATCTTTAAAGCCGCTATCAAATCCGGCA
AAACATATGGTACATATTATGCTGTCAGCGACAATAAGGGGCGGCCGTGGTCGATCGATTCCGCCATTCGGGAACTGGGG
TACAGGCCGCAAGTCAGCGCCTCTGACATCCTTGATGAAGACTGA

Upstream 100 bases:

>100_bases
AAGTGTTTCGTTCTCATTCAGGGCACCTCGAGACAGCCGGAATGAGGCATAAAGCGGTCGGTTTCTTAAAAACATGGCTG
TAAAACAGGAGGCGATAACC

Downstream 100 bases:

>100_bases
CGTATCATCTTCTAAGGTGATGATCTTTTTCTCCGCTTTCCTGCTCCTGCTTAAAAAATGATTATAGACGCTCTCCTTTC
TGTCTGCTACATTTTAGACA

Product: YtbQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKKVTIVGGNGTVGRVLAGGLAGEGYEVTVLDLKEPDDKQAVRFIRVDATDYNEVVKSIPAQTNALINLLAVKPSGDLLD
RQEFAKMTDIFFKATYTILRAAAELGVPKVVFASSNHVTDVYEKGGDSLLGRQINTNDYPQSKSLYGLLKLASENLGYLF
SHQLDAKVSVINLRIGTAAENELETLHAKPRSKKTLLSHPDLIGIFKAAIKSGKTYGTYYAVSDNKGRPWSIDSAIRELG
YRPQVSASDILDED

Sequences:

>Translated_254_residues
MKKVTIVGGNGTVGRVLAGGLAGEGYEVTVLDLKEPDDKQAVRFIRVDATDYNEVVKSIPAQTNALINLLAVKPSGDLLD
RQEFAKMTDIFFKATYTILRAAAELGVPKVVFASSNHVTDVYEKGGDSLLGRQINTNDYPQSKSLYGLLKLASENLGYLF
SHQLDAKVSVINLRIGTAAENELETLHAKPRSKKTLLSHPDLIGIFKAAIKSGKTYGTYYAVSDNKGRPWSIDSAIRELG
YRPQVSASDILDED
>Mature_254_residues
MKKVTIVGGNGTVGRVLAGGLAGEGYEVTVLDLKEPDDKQAVRFIRVDATDYNEVVKSIPAQTNALINLLAVKPSGDLLD
RQEFAKMTDIFFKATYTILRAAAELGVPKVVFASSNHVTDVYEKGGDSLLGRQINTNDYPQSKSLYGLLKLASENLGYLF
SHQLDAKVSVINLRIGTAAENELETLHAKPRSKKTLLSHPDLIGIFKAAIKSGKTYGTYYAVSDNKGRPWSIDSAIRELG
YRPQVSASDILDED

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 27664; Mature: 27664

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVTIVGGNGTVGRVLAGGLAGEGYEVTVLDLKEPDDKQAVRFIRVDATDYNEVVKSIP
CCEEEEECCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCC
AQTNALINLLAVKPSGDLLDRQEFAKMTDIFFKATYTILRAAAELGVPKVVFASSNHVTD
CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
VYEKGGDSLLGRQINTNDYPQSKSLYGLLKLASENLGYLFSHQLDAKVSVINLRIGTAAE
HHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCC
NELETLHAKPRSKKTLLSHPDLIGIFKAAIKSGKTYGTYYAVSDNKGRPWSIDSAIRELG
HHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCEEHHHHHHHCC
YRPQVSASDILDED
CCCCCCHHHCCCCC
>Mature Secondary Structure
MKKVTIVGGNGTVGRVLAGGLAGEGYEVTVLDLKEPDDKQAVRFIRVDATDYNEVVKSIP
CCEEEEECCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCC
AQTNALINLLAVKPSGDLLDRQEFAKMTDIFFKATYTILRAAAELGVPKVVFASSNHVTD
CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
VYEKGGDSLLGRQINTNDYPQSKSLYGLLKLASENLGYLFSHQLDAKVSVINLRIGTAAE
HHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCC
NELETLHAKPRSKKTLLSHPDLIGIFKAAIKSGKTYGTYYAVSDNKGRPWSIDSAIRELG
HHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCEEHHHHHHHCC
YRPQVSASDILDED
CCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763940; 9387221; 9384377 [H]