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The map label for this gene is yhbJ [H]

Identifier: 52786821

GI number: 52786821

Start: 2979495

End: 2980130

Strand: Reverse

Name: yhbJ [H]

Synonym: BLi03095

Alternate gene names: 52786821

Gene position: 2980130-2979495 (Counterclockwise)

Preceding gene: 52786822

Following gene: 52786819

Centisome position: 70.57

GC content: 43.08

Gene sequence:

>636_bases
ATGAGTAAAGGACGTTTGATGATCATCAATATGATTGGTATTATCGCAACTTTAGCGCTTGTCGCTGTATGCGGATATTA
CTATTATCAAAATAAACATTATGTCACGACGGATGAAGCAAGGGTTTCCGCAAATATGACAAAAATAACGGCGCCTGCTT
CCGGAAAATTAAGCGGCTGGGATGCAAAAGAAGGCGACCATATATCAGACGGCGACAACCTCGGAAAAATATCGGACGGG
CAGCAGTCGGTAGCTGTCAAAGCCATTTCCGACGGAACACTGGTCAAAAATACAGCCGTCAATCATAAAATCGTAAATGC
GGGGGTTGTCATCGGTCAAACTGCCGATATGGATAACATATATATTACGGCTCATATTAAAGAAACGGAATTACGCGATA
TCGAAAAAGACGACAAAGTGGACATCAAAGTCGACGGGGACCCTGATACAACGTTTGAAGGGAAGGTCGAAGAGATCGGA
TATGCGACAGATTCGGTATTTTCAATGTTTCCGGAAATGAACCAAAGCGGAGACTATACGAAAGTCACCGAGAAAGTTCA
AGTCAAGATTTCGATTCAAAATCCGTCCGCCAAATTGCTTCCCGGCATGAATGCGGAAGTGAAAATTTCGTTATAG

Upstream 100 bases:

>100_bases
CAATTGGAAAGGCAGCGACCGGAAAAGGAAGATCGCTCGTTCAGAAGCGCCTTCGCCTGCCAGACCCTTCAGCAAGTCAA
CAAAAGGAGATAGGATAAAC

Downstream 100 bases:

>100_bases
GCATTCGCAAAAAAGAGCAAGACGATCGTCTTGCTCTTTTTTAATGAAAAGGTTTTCAAAATTATAGAAATGTGCGCCTT
ACTTTTTCCCAGAACGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSKGRLMIINMIGIIATLALVAVCGYYYYQNKHYVTTDEARVSANMTKITAPASGKLSGWDAKEGDHISDGDNLGKISDG
QQSVAVKAISDGTLVKNTAVNHKIVNAGVVIGQTADMDNIYITAHIKETELRDIEKDDKVDIKVDGDPDTTFEGKVEEIG
YATDSVFSMFPEMNQSGDYTKVTEKVQVKISIQNPSAKLLPGMNAEVKISL

Sequences:

>Translated_211_residues
MSKGRLMIINMIGIIATLALVAVCGYYYYQNKHYVTTDEARVSANMTKITAPASGKLSGWDAKEGDHISDGDNLGKISDG
QQSVAVKAISDGTLVKNTAVNHKIVNAGVVIGQTADMDNIYITAHIKETELRDIEKDDKVDIKVDGDPDTTFEGKVEEIG
YATDSVFSMFPEMNQSGDYTKVTEKVQVKISIQNPSAKLLPGMNAEVKISL
>Mature_210_residues
SKGRLMIINMIGIIATLALVAVCGYYYYQNKHYVTTDEARVSANMTKITAPASGKLSGWDAKEGDHISDGDNLGKISDGQ
QSVAVKAISDGTLVKNTAVNHKIVNAGVVIGQTADMDNIYITAHIKETELRDIEKDDKVDIKVDGDPDTTFEGKVEEIGY
ATDSVFSMFPEMNQSGDYTKVTEKVQVKISIQNPSAKLLPGMNAEVKISL

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000089
- InterPro:   IPR006143
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 22878; Mature: 22747

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGRLMIINMIGIIATLALVAVCGYYYYQNKHYVTTDEARVSANMTKITAPASGKLSGW
CCCCCEEEEHHHHHHHHHHHHHHHHHHEECCCEEEECCCCEEECCEEEEECCCCCCCCCC
DAKEGDHISDGDNLGKISDGQQSVAVKAISDGTLVKNTAVNHKIVNAGVVIGQTADMDNI
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEEEECCEEEECCCCCCCE
YITAHIKETELRDIEKDDKVDIKVDGDPDTTFEGKVEEIGYATDSVFSMFPEMNQSGDYT
EEEEEEECCHHCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCEE
KVTEKVQVKISIQNPSAKLLPGMNAEVKISL
EEEEEEEEEEEEECCCHHCCCCCCCEEEEEC
>Mature Secondary Structure 
SKGRLMIINMIGIIATLALVAVCGYYYYQNKHYVTTDEARVSANMTKITAPASGKLSGW
CCCCEEEEHHHHHHHHHHHHHHHHHHEECCCEEEECCCCEEECCEEEEECCCCCCCCCC
DAKEGDHISDGDNLGKISDGQQSVAVKAISDGTLVKNTAVNHKIVNAGVVIGQTADMDNI
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEEEECCEEEECCCCCCCE
YITAHIKETELRDIEKDDKVDIKVDGDPDTTFEGKVEEIGYATDSVFSMFPEMNQSGDYT
EEEEEEECCHHCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCEE
KVTEKVQVKISIQNPSAKLLPGMNAEVKISL
EEEEEEEEEEEEECCCHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]