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The map label for this gene is sdpR [H]

Identifier: 52786659

GI number: 52786659

Start: 2811324

End: 2811644

Strand: Direct

Name: sdpR [H]

Synonym: BLi02927

Alternate gene names: 52786659

Gene position: 2811324-2811644 (Clockwise)

Preceding gene: 52786658

Following gene: 52786671

Centisome position: 66.58

GC content: 51.4

Gene sequence:

>321_bases
GTGACATCCGCCGCAAAACATGATGTGTTCCAAGCCGTTTCCGATCCCTCCCGGCGAAAAATGCTGGAGCTCCTCGCCGG
CAAAGAATTGCCTGTCACAGATATCAGCAGCCATTTCCCGATGAGCCGGACGGCTGTTTCAAAGCATCTCAGAGTTTTGT
CCGAAGCAGGCCTAGTCAGCGGGAGAAAAGCGGGCAGAGAAAAACTGTACAGGCTTCATCCCGAACCTCTCGCCGAGCTG
CAGCAGTGGCTCGCCTACTTCGACATGTATTGGGACAATAAGCTTTCCTTGCTAAAGCATAAAGTAGAAAACGATCAATA
A

Upstream 100 bases:

>100_bases
TTTCAAAAGCGGGAGAAAAGCAAGCGGATGTCCGCAATCGGATGAATGGCGGCTGGGAAACAATCGTCAATCAAAAGCTG
CGTCAGGCAGTTGAGGGCTA

Downstream 100 bases:

>100_bases
AACTGCAAAAAAAGCAATCTCGCTTTGGAGATTGCTTTTTGCAGTTAAGCGCGTACGCCGAAAAATGATTTAATCTTTGC
GAAAACGCCTTTATTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MTSAAKHDVFQAVSDPSRRKMLELLAGKELPVTDISSHFPMSRTAVSKHLRVLSEAGLVSGRKAGREKLYRLHPEPLAEL
QQWLAYFDMYWDNKLSLLKHKVENDQ

Sequences:

>Translated_106_residues
MTSAAKHDVFQAVSDPSRRKMLELLAGKELPVTDISSHFPMSRTAVSKHLRVLSEAGLVSGRKAGREKLYRLHPEPLAEL
QQWLAYFDMYWDNKLSLLKHKVENDQ
>Mature_105_residues
TSAAKHDVFQAVSDPSRRKMLELLAGKELPVTDISSHFPMSRTAVSKHLRVLSEAGLVSGRKAGREKLYRLHPEPLAELQ
QWLAYFDMYWDNKLSLLKHKVENDQ

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12146; Mature: 12015

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAAKHDVFQAVSDPSRRKMLELLAGKELPVTDISSHFPMSRTAVSKHLRVLSEAGLVS
CCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GRKAGREKLYRLHPEPLAELQQWLAYFDMYWDNKLSLLKHKVENDQ
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TSAAKHDVFQAVSDPSRRKMLELLAGKELPVTDISSHFPMSRTAVSKHLRVLSEAGLVS
CCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GRKAGREKLYRLHPEPLAELQQWLAYFDMYWDNKLSLLKHKVENDQ
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]