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The map label for this gene is yndB [H]

Identifier: 52786658

GI number: 52786658

Start: 2810896

End: 2811324

Strand: Direct

Name: yndB [H]

Synonym: BLi02926

Alternate gene names: 52786658

Gene position: 2810896-2811324 (Clockwise)

Preceding gene: 52786648

Following gene: 52786659

Centisome position: 66.57

GC content: 51.75

Gene sequence:

>429_bases
ATGAGCAATCAACTAGTGCCTGATATACATAAACAGGCTGTTTTTCACGCATCGATAGAAAAAGTGTGGGAGGCCGTCGC
CACCAGTGAAGGCATCGCCGCCTGGTTTATGCCTAATGATTTCCGCCCGGAGATCGGCTGCGAATTCACCCTGCAGTCTC
CTTTCGGCCCCTCCCCGTGCAAAGTGATCGAGCTTGATGCGCCGCATCGACTCGCTTTCAGCTGGGATACGTCGGGATGG
ATCGTCACATTTGAATTGAAAGAGCTTTCTGCAGAAAAAACCGAATTTACCCTGATTCATTCAGGATGGGGTGCGCCGGA
AGAAACGGTTTCAAAAGCGGGAGAAAAGCAAGCGGATGTCCGCAATCGGATGAATGGCGGCTGGGAAACAATCGTCAATC
AAAAGCTGCGTCAGGCAGTTGAGGGCTAG

Upstream 100 bases:

>100_bases
TTGTCCCAGGGAATTATGACGGAACATTGACATAAAACTAAAAGGTTTCATATAATAGAAAGGAAACCATTTGGTTTTAC
TTTTTTCTAGGAGGTCTATT

Downstream 100 bases:

>100_bases
TGACATCCGCCGCAAAACATGATGTGTTCCAAGCCGTTTCCGATCCCTCCCGGCGAAAAATGCTGGAGCTCCTCGCCGGC
AAAGAATTGCCTGTCACAGA

Product: YndB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSNQLVPDIHKQAVFHASIEKVWEAVATSEGIAAWFMPNDFRPEIGCEFTLQSPFGPSPCKVIELDAPHRLAFSWDTSGW
IVTFELKELSAEKTEFTLIHSGWGAPEETVSKAGEKQADVRNRMNGGWETIVNQKLRQAVEG

Sequences:

>Translated_142_residues
MSNQLVPDIHKQAVFHASIEKVWEAVATSEGIAAWFMPNDFRPEIGCEFTLQSPFGPSPCKVIELDAPHRLAFSWDTSGW
IVTFELKELSAEKTEFTLIHSGWGAPEETVSKAGEKQADVRNRMNGGWETIVNQKLRQAVEG
>Mature_141_residues
SNQLVPDIHKQAVFHASIEKVWEAVATSEGIAAWFMPNDFRPEIGCEFTLQSPFGPSPCKVIELDAPHRLAFSWDTSGWI
VTFELKELSAEKTEFTLIHSGWGAPEETVSKAGEKQADVRNRMNGGWETIVNQKLRQAVEG

Specific function: Unknown

COG id: COG3832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AHA1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013538 [H]

Pfam domain/function: PF08327 AHSA1 [H]

EC number: NA

Molecular weight: Translated: 15872; Mature: 15741

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQLVPDIHKQAVFHASIEKVWEAVATSEGIAAWFMPNDFRPEIGCEFTLQSPFGPSPC
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCC
KVIELDAPHRLAFSWDTSGWIVTFELKELSAEKTEFTLIHSGWGAPEETVSKAGEKQADV
EEEEECCCCEEEEEECCCCEEEEEEHHHCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHH
RNRMNGGWETIVNQKLRQAVEG
HHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNQLVPDIHKQAVFHASIEKVWEAVATSEGIAAWFMPNDFRPEIGCEFTLQSPFGPSPC
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCC
KVIELDAPHRLAFSWDTSGWIVTFELKELSAEKTEFTLIHSGWGAPEETVSKAGEKQADV
EEEEECCCCEEEEEECCCCEEEEEEHHHCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHH
RNRMNGGWETIVNQKLRQAVEG
HHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]