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The map label for this gene is yccC1 [H]

Identifier: 52786512

GI number: 52786512

Start: 2668447

End: 2669256

Strand: Reverse

Name: yccC1 [H]

Synonym: BLi02777

Alternate gene names: 52786512

Gene position: 2669256-2668447 (Counterclockwise)

Preceding gene: 52786513

Following gene: 52786511

Centisome position: 63.21

GC content: 43.46

Gene sequence:

>810_bases
ATGTCAAGCAGTCATATGACTTTTCATCACCTTGACATTCTCAAGCAAAATATAGAGAGTTTCTTCCGGAATGAGGATGT
TGCCGGAATTGTGATATCGCATGGAACAGATACCCTTGAAGAGACTTCGTATTTCCTTCATCTGGTTATTTCTGATGAAA
GGCCGGTCGTGTTAACGGGGTCGCAAAGAGGACCGACACTTGAAGGTACAGATGCGTTTGTGAACCTAAGACAAGCTTTC
TTATTAGCGGCACATCCTGATGCGCGAGGCTTAGGGGTAACAGTGTTGTTTAATGAGAGGGTTTTTGCTGCTCGATATGT
GAAAAAACAGCATGCGTCAAATGTTGATGGTTTTTTCTCACCGGGATTCGGTTATTTGGGAACTGCCGATCAAGATGAGA
TCGCAATTCATCAAAGATTAATCAAGCGTGAGACGTATCAGCTGATTCAACCATTACCAAATGTGGAACTTATTAAGTGT
TCACTTGGATCAGACGGAAAGTTTATAGATTATGCAGTTAAGTGCGGAAGTGCAGGAATCATTATTGAGGCGCCGGGAAG
AGGGCATACGGCTCCAGCAATATTAGAAAGTGCAAAGAAAGCCGCAGAGAAAGGGATTCCTGTCGTTCTGACAACAAGTG
CTCACGAAGGTGAAGTCAAGGGAGTATATGGATTCAAAGGAAGTGCTTCAACATATGCAGATGCCGGAATCATACTTGGC
GGCAGCTATGACAGTAAGAAAGCAAGGATCAAACTCGCTGTTTTGCTGGCTGCTGGACAGAAGATTGATGAGGCTAGCTT
TAAATATTAA

Upstream 100 bases:

>100_bases
AACAGGTCTATTAGAAGCAGGTGCTATGACAGGTGAAGAGCTTTCTGAAATGTGTCGACTGCCTTCTCATATAGAGATTG
AAATCAAGTCAGCCTTTTAA

Downstream 100 bases:

>100_bases
GAATAATAGGGGGAGATTATATTGAAGCCTGTACACACGAAGTATTCAACACGGGATGGGGGCCATTACGTGCCAGCTAT
GGAACACAATGATGTTCTCT

Product: YccC1

Products: NA

Alternate protein names: L-ASNase; L-asparagine amidohydrolase [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSSSHMTFHHLDILKQNIESFFRNEDVAGIVISHGTDTLEETSYFLHLVISDERPVVLTGSQRGPTLEGTDAFVNLRQAF
LLAAHPDARGLGVTVLFNERVFAARYVKKQHASNVDGFFSPGFGYLGTADQDEIAIHQRLIKRETYQLIQPLPNVELIKC
SLGSDGKFIDYAVKCGSAGIIIEAPGRGHTAPAILESAKKAAEKGIPVVLTTSAHEGEVKGVYGFKGSASTYADAGIILG
GSYDSKKARIKLAVLLAAGQKIDEASFKY

Sequences:

>Translated_269_residues
MSSSHMTFHHLDILKQNIESFFRNEDVAGIVISHGTDTLEETSYFLHLVISDERPVVLTGSQRGPTLEGTDAFVNLRQAF
LLAAHPDARGLGVTVLFNERVFAARYVKKQHASNVDGFFSPGFGYLGTADQDEIAIHQRLIKRETYQLIQPLPNVELIKC
SLGSDGKFIDYAVKCGSAGIIIEAPGRGHTAPAILESAKKAAEKGIPVVLTTSAHEGEVKGVYGFKGSASTYADAGIILG
GSYDSKKARIKLAVLLAAGQKIDEASFKY
>Mature_268_residues
SSSHMTFHHLDILKQNIESFFRNEDVAGIVISHGTDTLEETSYFLHLVISDERPVVLTGSQRGPTLEGTDAFVNLRQAFL
LAAHPDARGLGVTVLFNERVFAARYVKKQHASNVDGFFSPGFGYLGTADQDEIAIHQRLIKRETYQLIQPLPNVELIKCS
LGSDGKFIDYAVKCGSAGIIIEAPGRGHTAPAILESAKKAAEKGIPVVLTTSAHEGEVKGVYGFKGSASTYADAGIILGG
SYDSKKARIKLAVLLAAGQKIDEASFKY

Specific function: Unknown

COG id: COG0252

COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the asparaginase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789327, Length=234, Percent_Identity=28.2051282051282, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788065, Length=281, Percent_Identity=27.4021352313167, Blast_Score=74, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6323189, Length=272, Percent_Identity=30.8823529411765, Blast_Score=119, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6323187, Length=272, Percent_Identity=30.8823529411765, Blast_Score=119, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6323186, Length=272, Percent_Identity=30.8823529411765, Blast_Score=119, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6323184, Length=272, Percent_Identity=30.8823529411765, Blast_Score=119, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6320527, Length=249, Percent_Identity=30.1204819277108, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006034
- InterPro:   IPR020827 [H]

Pfam domain/function: PF00710 Asparaginase [H]

EC number: =3.5.1.1 [H]

Molecular weight: Translated: 29067; Mature: 28936

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00917 ASN_GLN_ASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSHMTFHHLDILKQNIESFFRNEDVAGIVISHGTDTLEETSYFLHLVISDERPVVLTG
CCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCEEEEEEEECCCCCEEEEC
SQRGPTLEGTDAFVNLRQAFLLAAHPDARGLGVTVLFNERVFAARYVKKQHASNVDGFFS
CCCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC
PGFGYLGTADQDEIAIHQRLIKRETYQLIQPLPNVELIKCSLGSDGKFIDYAVKCGSAGI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCE
IIEAPGRGHTAPAILESAKKAAEKGIPVVLTTSAHEGEVKGVYGFKGSASTYADAGIILG
EEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEE
GSYDSKKARIKLAVLLAAGQKIDEASFKY
CCCCCCCEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SSSHMTFHHLDILKQNIESFFRNEDVAGIVISHGTDTLEETSYFLHLVISDERPVVLTG
CCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCEEEEEEEECCCCCEEEEC
SQRGPTLEGTDAFVNLRQAFLLAAHPDARGLGVTVLFNERVFAARYVKKQHASNVDGFFS
CCCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCC
PGFGYLGTADQDEIAIHQRLIKRETYQLIQPLPNVELIKCSLGSDGKFIDYAVKCGSAGI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCE
IIEAPGRGHTAPAILESAKKAAEKGIPVVLTTSAHEGEVKGVYGFKGSASTYADAGIILG
EEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEE
GSYDSKKARIKLAVLLAAGQKIDEASFKY
CCCCCCCEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916233 [H]