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The map label for this gene is yqeU [H]

Identifier: 52786471

GI number: 52786471

Start: 2631113

End: 2631880

Strand: Reverse

Name: yqeU [H]

Synonym: BLi02736

Alternate gene names: 52786471

Gene position: 2631880-2631113 (Counterclockwise)

Preceding gene: 52786472

Following gene: 52786470

Centisome position: 62.33

GC content: 49.09

Gene sequence:

>768_bases
ATGCAACGATATTTTATCGAACAATCAAAACAAGAGGTCACAGCCGCACCCGCATTCTCGATCAAAGGCGAAGACGTTCA
TCACATTGCGACTGTGATGAGGATGTCTCCCGGAGATGAGGTCATTTGCTGTGCAAAAGACGGCCATGAAGCGAAATGCC
GGATCGAGTCCGTCACTAAAGAAGAGGTTTTATTGAGCGTTATCGAATGGACGGGGGAAACACGCGAACTGCCCGTCCAG
ATCCATATTGCAAACGGCCTTCCAAAAGGAGATAAGCTGGAATGGATCATTCAAAAAGGGACAGAGCTCGGTGCAAGCTC
GTTTATTCCTTTTCAGGCATCGCGCTCCGTTGTTAAACTTGATGAAAAAAAGGCAAAGAAAAAACGGGAAAGGTGGGCGA
AAATCGCCAAGGAAGCGGCAGAACAGTCCCACAGAAACGCGATTCCCGATGTGGCGCCGGTTCACACGTTTCAACGTTTG
CTTGAGAGCCTTGAGGACTTCGATAAATGTGTCGTTGCATACGAAGAGTCATCAAAGCAAGGCGAGACGAGCCGGTTTCA
ATCCGTGCTCAAAAGCCTTTCTGAAGGATCATCCGTACTCATGGTGTTTGGTCCTGAAGGCGGATTTACAGAAGAGGAAA
TTGAGGCGCTAAAAGAAAAAGGTGCCCTCGCCTGCGGGCTCGGTCCGCGGATCTTAAGGGCGGAAACAGCTCCGCTGTAC
GCGTTGGCGGCAGTTTCTTATCATACAGAGTTATTAAGAGGTGAATAA

Upstream 100 bases:

>100_bases
CACTGGTGAAAGAAGGCTTTACGATCGTTGAGGTTCTTTCAATGGAGGACTGGGTCAGCATCATCGCTAAAAAATAATCG
TTAGTAGGTGTGACAAGCGT

Downstream 100 bases:

>100_bases
CAATGGCAACCGTTGCATTTCATACACTTGGCTGCAAGGTCAACCATTATGAAACAGAAGCAATCTGGCAGCTTTTTAAA
GAAGCCGGCTACGAAAGAAA

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MQRYFIEQSKQEVTAAPAFSIKGEDVHHIATVMRMSPGDEVICCAKDGHEAKCRIESVTKEEVLLSVIEWTGETRELPVQ
IHIANGLPKGDKLEWIIQKGTELGASSFIPFQASRSVVKLDEKKAKKKRERWAKIAKEAAEQSHRNAIPDVAPVHTFQRL
LESLEDFDKCVVAYEESSKQGETSRFQSVLKSLSEGSSVLMVFGPEGGFTEEEIEALKEKGALACGLGPRILRAETAPLY
ALAAVSYHTELLRGE

Sequences:

>Translated_255_residues
MQRYFIEQSKQEVTAAPAFSIKGEDVHHIATVMRMSPGDEVICCAKDGHEAKCRIESVTKEEVLLSVIEWTGETRELPVQ
IHIANGLPKGDKLEWIIQKGTELGASSFIPFQASRSVVKLDEKKAKKKRERWAKIAKEAAEQSHRNAIPDVAPVHTFQRL
LESLEDFDKCVVAYEESSKQGETSRFQSVLKSLSEGSSVLMVFGPEGGFTEEEIEALKEKGALACGLGPRILRAETAPLY
ALAAVSYHTELLRGE
>Mature_255_residues
MQRYFIEQSKQEVTAAPAFSIKGEDVHHIATVMRMSPGDEVICCAKDGHEAKCRIESVTKEEVLLSVIEWTGETRELPVQ
IHIANGLPKGDKLEWIIQKGTELGASSFIPFQASRSVVKLDEKKAKKKRERWAKIAKEAAEQSHRNAIPDVAPVHTFQRL
LESLEDFDKCVVAYEESSKQGETSRFQSVLKSLSEGSSVLMVFGPEGGFTEEEIEALKEKGALACGLGPRILRAETAPLY
ALAAVSYHTELLRGE

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=220, Percent_Identity=32.2727272727273, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 28269; Mature: 28269

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYFIEQSKQEVTAAPAFSIKGEDVHHIATVMRMSPGDEVICCAKDGHEAKCRIESVTK
CCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH
EEVLLSVIEWTGETRELPVQIHIANGLPKGDKLEWIIQKGTELGASSFIPFQASRSVVKL
HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHCCHHHHH
DEKKAKKKRERWAKIAKEAAEQSHRNAIPDVAPVHTFQRLLESLEDFDKCVVAYEESSKQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHCCCCC
GETSRFQSVLKSLSEGSSVLMVFGPEGGFTEEEIEALKEKGALACGLGPRILRAETAPLY
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEECCCCHHHHCCCCCHH
ALAAVSYHTELLRGE
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MQRYFIEQSKQEVTAAPAFSIKGEDVHHIATVMRMSPGDEVICCAKDGHEAKCRIESVTK
CCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH
EEVLLSVIEWTGETRELPVQIHIANGLPKGDKLEWIIQKGTELGASSFIPFQASRSVVKL
HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHCCHHHHH
DEKKAKKKRERWAKIAKEAAEQSHRNAIPDVAPVHTFQRLLESLEDFDKCVVAYEESSKQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHCCCCC
GETSRFQSVLKSLSEGSSVLMVFGPEGGFTEEEIEALKEKGALACGLGPRILRAETAPLY
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEECCCCHHHHCCCCCHH
ALAAVSYHTELLRGE
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9023197; 9384377 [H]