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The map label for this gene is yojM [H]

Identifier: 52786007

GI number: 52786007

Start: 2223473

End: 2224066

Strand: Reverse

Name: yojM [H]

Synonym: BLi02263

Alternate gene names: 52786007

Gene position: 2224066-2223473 (Counterclockwise)

Preceding gene: 52786008

Following gene: 52786006

Centisome position: 52.67

GC content: 47.14

Gene sequence:

>594_bases
TTGAGAACATTACATTACATATTGCTCGCATGTATGTCCGTTTGTTTGGCAGCTGCATGCACACAGCAAAAAGAAATCGA
GCAAAAAAATGCCGAACAGGAACATAAAGAAACTTTTGAAACGATGACACAGCCATTAAAAGTACCGCTGATCAAACGCG
ACGGGACGGAGACCGGTTTTATAGAAGTGTATGAATCTGCTGCAGAAGGCCTTGATATTAGAGTGAGCGCCCATGATCTG
CCGCCGGGCATGCTTGCTTTTCATATTCATGAAACGGGCGTTTGCAAAAAGCCTGATTTTGAAAGTGCGGGTGCTCATTT
CAATCCTGATCAAAAGGAGCACGGCTTTAACAATCCAAAAGGGCCGCATGCCGGTGATTTGCCGAATATTGAAGTCGGAG
CAGACGGCAAAGTCGACGTCATCGTCAATGCGCCGGCAGTCACCCTCGATCAGAAAAGCAGGTTCAGTCTGCTGGATCAT
GACGGAAGTGCTTTTATTATTCACGAGCATCAGGATGACGATTTGACAAATCCATCAGGTAACTCCGGAGCCCGGATGGT
TTGCGGAGCGCTGACGAACAGCGGAAAAAAGTGA

Upstream 100 bases:

>100_bases
TTTATATGGCTTTTTTTTGCGTGGTTTCAGGATGGGAAGGACAGGTTTAATGCCCCTCTTCATTGTCTAAACTGAAAAGA
AAAGCGAAGGGGGAAGCTGT

Downstream 100 bases:

>100_bases
ATCGGCGCCTGGAAGCCGTTTATATTGAGGGCAGCGCGTCTTTTCTAGTATACTTAAATATAGAAGACGCTTTTAGAAAG
GAATTTTACAACACATGAAA

Product: YojM

Products: O2; H2O2

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRTLHYILLACMSVCLAAACTQQKEIEQKNAEQEHKETFETMTQPLKVPLIKRDGTETGFIEVYESAAEGLDIRVSAHDL
PPGMLAFHIHETGVCKKPDFESAGAHFNPDQKEHGFNNPKGPHAGDLPNIEVGADGKVDVIVNAPAVTLDQKSRFSLLDH
DGSAFIIHEHQDDDLTNPSGNSGARMVCGALTNSGKK

Sequences:

>Translated_197_residues
MRTLHYILLACMSVCLAAACTQQKEIEQKNAEQEHKETFETMTQPLKVPLIKRDGTETGFIEVYESAAEGLDIRVSAHDL
PPGMLAFHIHETGVCKKPDFESAGAHFNPDQKEHGFNNPKGPHAGDLPNIEVGADGKVDVIVNAPAVTLDQKSRFSLLDH
DGSAFIIHEHQDDDLTNPSGNSGARMVCGALTNSGKK
>Mature_197_residues
MRTLHYILLACMSVCLAAACTQQKEIEQKNAEQEHKETFETMTQPLKVPLIKRDGTETGFIEVYESAAEGLDIRVSAHDL
PPGMLAFHIHETGVCKKPDFESAGAHFNPDQKEHGFNNPKGPHAGDLPNIEVGADGKVDVIVNAPAVTLDQKSRFSLLDH
DGSAFIIHEHQDDDLTNPSGNSGARMVCGALTNSGKK

Specific function: Destroys Radicals Which Are Normally Produced Within The Cells And Which Are Toxic To Biological Systems. This Enzyme Is Highly Thermostable. [C]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI4826665, Length=153, Percent_Identity=30.0653594771242, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI4507149, Length=153, Percent_Identity=30.718954248366, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17554806, Length=197, Percent_Identity=29.4416243654822, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71981876, Length=151, Percent_Identity=32.4503311258278, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71981879, Length=121, Percent_Identity=34.7107438016529, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85725006, Length=197, Percent_Identity=28.4263959390863, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45551081, Length=130, Percent_Identity=34.6153846153846, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24652737, Length=130, Percent_Identity=34.6153846153846, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI116007680, Length=130, Percent_Identity=34.6153846153846, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: 1.15.1.1

Molecular weight: Translated: 21412; Mature: 21412

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLHYILLACMSVCLAAACTQQKEIEQKNAEQEHKETFETMTQPLKVPLIKRDGTETGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCH
IEVYESAAEGLDIRVSAHDLPPGMLAFHIHETGVCKKPDFESAGAHFNPDQKEHGFNNPK
HHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
GPHAGDLPNIEVGADGKVDVIVNAPAVTLDQKSRFSLLDHDGSAFIIHEHQDDDLTNPSG
CCCCCCCCCEEECCCCCEEEEEECCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCC
NSGARMVCGALTNSGKK
CCCCEEEEEHHHCCCCC
>Mature Secondary Structure
MRTLHYILLACMSVCLAAACTQQKEIEQKNAEQEHKETFETMTQPLKVPLIKRDGTETGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCH
IEVYESAAEGLDIRVSAHDLPPGMLAFHIHETGVCKKPDFESAGAHFNPDQKEHGFNNPK
HHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
GPHAGDLPNIEVGADGKVDVIVNAPAVTLDQKSRFSLLDHDGSAFIIHEHQDDDLTNPSG
CCCCCCCCCEEECCCCCEEEEEECCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCC
NSGARMVCGALTNSGKK
CCCCEEEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe; Cu; Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: O2.-; H+

Specific reaction: 2 O2*- + 2 H+ = O2 + H2O2

General reaction: Redox reaction [C]

Inhibitor: F- [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]