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The map label for this gene is 52785997

Identifier: 52785997

GI number: 52785997

Start: 2208719

End: 2209120

Strand: Reverse

Name: 52785997

Synonym: BLi02252

Alternate gene names: NA

Gene position: 2209120-2208719 (Counterclockwise)

Preceding gene: 52786001

Following gene: 52785996

Centisome position: 52.32

GC content: 47.01

Gene sequence:

>402_bases
ATGAATATTGAACAGATGCTGTATGACACCGCAGTCGAATTGATCAAAAAGAGGTATCCGACCGGATGGGGCGGGGCAGC
CGCCATGTATACCGAGGACGGAAGAATCTTAACGAGCGTAGCCCCGGAAGTAATCAACGCTTCAACAGAATTATGCATTG
AAACGGGCGCCATTCTCGAAGCCCATAAGTATCAGGCGAAAATAACGCACTCTGTTTGTGTTGCAAGAGACGACGAACAT
TCCGAATGCAAGGTATTAACGCCGTGCGGGGTATGCCAGGAAAGACTTTTTTATTGGGGTCCTGATCTTAAAGCAGCTGT
AACTGTACCGGATGGGCGCCTGGTTTATAAAACTTTAAAGGAAATACAGCCATACCATTGGTTTGCCGCGTATCAAAAGT
AG

Upstream 100 bases:

>100_bases
TAGTGATTTGTCTTTAATAACTTCATTTACCCCCGTTCCAACATCAGGTATTGTATAAAGAGAGACTTTAGATTAAACAA
TGGTTGGGAGATGTTGATGA

Downstream 100 bases:

>100_bases
CAGGGGAGGGGCGTTCGATGTTCAAGAGCCGCAAGGTTTATCTCAGACCTGTTGAAAAAGGCGATATGGAGAGCTTTTAC
AAAGCCGTTCAAAATGAAGA

Product: cytidine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNIEQMLYDTAVELIKKRYPTGWGGAAAMYTEDGRILTSVAPEVINASTELCIETGAILEAHKYQAKITHSVCVARDDEH
SECKVLTPCGVCQERLFYWGPDLKAAVTVPDGRLVYKTLKEIQPYHWFAAYQK

Sequences:

>Translated_133_residues
MNIEQMLYDTAVELIKKRYPTGWGGAAAMYTEDGRILTSVAPEVINASTELCIETGAILEAHKYQAKITHSVCVARDDEH
SECKVLTPCGVCQERLFYWGPDLKAAVTVPDGRLVYKTLKEIQPYHWFAAYQK
>Mature_133_residues
MNIEQMLYDTAVELIKKRYPTGWGGAAAMYTEDGRILTSVAPEVINASTELCIETGAILEAHKYQAKITHSVCVARDDEH
SECKVLTPCGVCQERLFYWGPDLKAAVTVPDGRLVYKTLKEIQPYHWFAAYQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14970; Mature: 14970

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEQMLYDTAVELIKKRYPTGWGGAAAMYTEDGRILTSVAPEVINASTELCIETGAILE
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEHHCHHHHCCCHHHHHHCCCHHH
AHKYQAKITHSVCVARDDEHSECKVLTPCGVCQERLFYWGPDLKAAVTVPDGRLVYKTLK
HHHHHHHHHHHEEEECCCCCCCCEEECCCHHHHHHHEEECCCCCEEEECCCCHHHHHHHH
EIQPYHWFAAYQK
HCCCCEEEEEECC
>Mature Secondary Structure
MNIEQMLYDTAVELIKKRYPTGWGGAAAMYTEDGRILTSVAPEVINASTELCIETGAILE
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEHHCHHHHCCCHHHHHHCCCHHH
AHKYQAKITHSVCVARDDEHSECKVLTPCGVCQERLFYWGPDLKAAVTVPDGRLVYKTLK
HHHHHHHHHHHEEEECCCCCCCCEEECCCHHHHHHHEEECCCCCEEEECCCCHHHHHHHH
EIQPYHWFAAYQK
HCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA