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The map label for this gene is yvdS [H]

Identifier: 52785766

GI number: 52785766

Start: 1962440

End: 1962775

Strand: Direct

Name: yvdS [H]

Synonym: BLi02010

Alternate gene names: 52785766

Gene position: 1962440-1962775 (Clockwise)

Preceding gene: 52785765

Following gene: 52785767

Centisome position: 46.47

GC content: 46.13

Gene sequence:

>336_bases
TTGAGTTGGCTCCTCGTAATTGCTGCGGGTTTTTTGGAAGTGGTGTGGGCCTCAGGTCTTAAACATGCGGATTCATTCGT
CGATTGGCTGATGATCTTTGTACTGATCGCGGTAAGCTTTATTATGCTGATACGATCTTACAGGAACATTCCGATGGCGT
CGGCTTATACCGTATTTGTCGGGATCGGAACGGCCGGCACATATGTGACGGGTATTTTTATGGGCGAGACCTTTTCAGGA
GGGCAAATATTCTTTTTGATCGTGCTGTTGGGAGGCATTATTGGCATGAAGATGTTTACAAAAGAGAACAATGCCCAGTC
AGGAGGTGATGAATGA

Upstream 100 bases:

>100_bases
AAGCATAGGAACCAAGTAAAAAATGACCGGCTGCAGCTGTTCATTTTTTATCGGACTAAAAAATGACTGACGTTCATTCA
CAATAGGAAGGGTGTTATCA

Downstream 100 bases:

>100_bases
TGCCATGGATGTTTTTAGTGATTTCCGGAATCGAAGAGGTTATTGCCGCCATCGCTATGAAATATGTAGACGGCACAAGA
AAAAAATGGCCGATTATCGT

Product: YvdS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSWLLVIAAGFLEVVWASGLKHADSFVDWLMIFVLIAVSFIMLIRSYRNIPMASAYTVFVGIGTAGTYVTGIFMGETFSG
GQIFFLIVLLGGIIGMKMFTKENNAQSGGDE

Sequences:

>Translated_111_residues
MSWLLVIAAGFLEVVWASGLKHADSFVDWLMIFVLIAVSFIMLIRSYRNIPMASAYTVFVGIGTAGTYVTGIFMGETFSG
GQIFFLIVLLGGIIGMKMFTKENNAQSGGDE
>Mature_110_residues
SWLLVIAAGFLEVVWASGLKHADSFVDWLMIFVLIAVSFIMLIRSYRNIPMASAYTVFVGIGTAGTYVTGIFMGETFSGG
QIFFLIVLLGGIIGMKMFTKENNAQSGGDE

Specific function: Suppresses A Groel Mutation And Mimics The Effect Of Groe Overexpression. Could Act As A Chaperone. [C]

COG id: COG2076

COG function: function code P; Membrane transporters of cations and cationic drugs

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small multidrug resistance (SMR) protein family [H]

Homologues:

Organism=Escherichia coli, GI87082378, Length=105, Percent_Identity=36.1904761904762, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000390 [H]

Pfam domain/function: PF00893 Multi_Drug_Res [H]

EC number: NA

Molecular weight: Translated: 12070; Mature: 11939

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLLVIAAGFLEVVWASGLKHADSFVDWLMIFVLIAVSFIMLIRSYRNIPMASAYTVFV
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
GIGTAGTYVTGIFMGETFSGGQIFFLIVLLGGIIGMKMFTKENNAQSGGDE
ECCCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SWLLVIAAGFLEVVWASGLKHADSFVDWLMIFVLIAVSFIMLIRSYRNIPMASAYTVFV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
GIGTAGTYVTGIFMGETFSGGQIFFLIVLLGGIIGMKMFTKENNAQSGGDE
ECCCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]