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The map label for this gene is ymaB [H]

Identifier: 52785725

GI number: 52785725

Start: 1924245

End: 1924862

Strand: Direct

Name: ymaB [H]

Synonym: BLi01968

Alternate gene names: 52785725

Gene position: 1924245-1924862 (Clockwise)

Preceding gene: 52785724

Following gene: 52785727

Centisome position: 45.57

GC content: 46.6

Gene sequence:

>618_bases
ATGGGAAAAATGGACGAAATGATTCTCGTGGTCCCGCGGGAAAACGTATTTGCAAATGAAACGCTGACCTTCCAAGGCGT
CAACAGCGACGGTGAGACGATCGGGAAGATCATGGCGCATATTGAACGCCACTTCAGTGAAATGAGAAGGGGAGACGCCG
AGGAAGATCCTGCATTTAAACAGCCGATCCCTTATGTTGTCATCAAAAGAGAAGACGAAATATTTGTATATGAGCGGCTC
GAAGGCGGAGGGGAAGCGCGGCTTCACAACAAGCTGTCACTCGGCTTCGGCGGACACATGAACTTTGCCGAAGGGCTTGA
CTTTCCCGATATTCTGAAGTTGAATACAGACCGCGAACTTGATGAAGAGCTTCTAATCGAGGAATCAGCTAAAGAAAAAA
TGGTGACGCTCGGACTGATTAATGATGATGAAAACAGCGTCGGGAAAGTACATATCGGAATCCTTTCAGCGCTTGAATTA
AAACCGGGCGCACACGTTGAAGTCAAAGAAAAGGAGCAGATTGCCGGCCGTTGGATGAAAGCCAGTGATCTGAAAGAAAA
AAGCGTCTATGACAGACTTGAATCTTGGTCACAGTTTGTCGTTGATATCTTAGTTTAA

Upstream 100 bases:

>100_bases
GGCGCGCCAGCGCCCAAGCCCTGCCCTTCAGCTATTGATACACGGCAAAATGAGAGCAGAACGAATCTGCTCTTTTCACT
TTGAGGAGGAAACGGATACA

Downstream 100 bases:

>100_bases
ATTGGAAAACTCGCTGATCAGCGAGTTTTCTTTTCGTATAGAACCGGTTTCCATTGAAAAAATGAGCCATGCTTTTCGAT
CAGCCCGAAGCCGGGATATG

Product: YmaB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MGKMDEMILVVPRENVFANETLTFQGVNSDGETIGKIMAHIERHFSEMRRGDAEEDPAFKQPIPYVVIKREDEIFVYERL
EGGGEARLHNKLSLGFGGHMNFAEGLDFPDILKLNTDRELDEELLIEESAKEKMVTLGLINDDENSVGKVHIGILSALEL
KPGAHVEVKEKEQIAGRWMKASDLKEKSVYDRLESWSQFVVDILV

Sequences:

>Translated_205_residues
MGKMDEMILVVPRENVFANETLTFQGVNSDGETIGKIMAHIERHFSEMRRGDAEEDPAFKQPIPYVVIKREDEIFVYERL
EGGGEARLHNKLSLGFGGHMNFAEGLDFPDILKLNTDRELDEELLIEESAKEKMVTLGLINDDENSVGKVHIGILSALEL
KPGAHVEVKEKEQIAGRWMKASDLKEKSVYDRLESWSQFVVDILV
>Mature_204_residues
GKMDEMILVVPRENVFANETLTFQGVNSDGETIGKIMAHIERHFSEMRRGDAEEDPAFKQPIPYVVIKREDEIFVYERLE
GGGEARLHNKLSLGFGGHMNFAEGLDFPDILKLNTDRELDEELLIEESAKEKMVTLGLINDDENSVGKVHIGILSALELK
PGAHVEVKEKEQIAGRWMKASDLKEKSVYDRLESWSQFVVDILV

Specific function: Unknown

COG id: COG4112

COG function: function code R; Predicted phosphoesterase (MutT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23229; Mature: 23098

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKMDEMILVVPRENVFANETLTFQGVNSDGETIGKIMAHIERHFSEMRRGDAEEDPAFK
CCCCCCEEEEEECCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QPIPYVVIKREDEIFVYERLEGGGEARLHNKLSLGFGGHMNFAEGLDFPDILKLNTDREL
CCCCEEEEECCCCEEEEEECCCCCCEEEECEEEECCCCCCCHHHCCCCCCEEEECCCCCC
DEELLIEESAKEKMVTLGLINDDENSVGKVHIGILSALELKPGAHVEVKEKEQIAGRWMK
CHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCEEECCHHHHHHCCCC
ASDLKEKSVYDRLESWSQFVVDILV
HHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKMDEMILVVPRENVFANETLTFQGVNSDGETIGKIMAHIERHFSEMRRGDAEEDPAFK
CCCCCEEEEEECCCEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QPIPYVVIKREDEIFVYERLEGGGEARLHNKLSLGFGGHMNFAEGLDFPDILKLNTDREL
CCCCEEEEECCCCEEEEEECCCCCCEEEECEEEECCCCCCCHHHCCCCCCEEEECCCCCC
DEELLIEESAKEKMVTLGLINDDENSVGKVHIGILSALELKPGAHVEVKEKEQIAGRWMK
CHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCEEECCHHHHHHCCCC
ASDLKEKSVYDRLESWSQFVVDILV
HHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8407798 [H]