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The map label for this gene is ylbH [H]

Identifier: 52785478

GI number: 52785478

Start: 1673871

End: 1674437

Strand: Direct

Name: ylbH [H]

Synonym: BLi01718

Alternate gene names: 52785478

Gene position: 1673871-1674437 (Clockwise)

Preceding gene: 52785477

Following gene: 52785479

Centisome position: 39.64

GC content: 51.85

Gene sequence:

>567_bases
ATGAGAGTGATTTCTGGGACGTATAAGGGACGTGCCTTAAAGGCGGTTCCCGGCACGTCGACAAGGCCGACGACCGATAA
AGTAAAGGAATCCATCTTTAATATGGTCGGCCCGTATTTTGAAGGCGGCACCGGCCTTGATCTGTACGCGGGAAGCGGCG
GATTGGGCATTGAAGCGCTGTCGCGGGGATTTGACCGCTTCATTTTTGTCGACCGGGATTTTAAAGCGATTCAAACCGTG
AAAGGAAATTTGAAAACGCTGGGCTTAGAAAAGTGCGCCGAAGTGTACAGAAATGACGCAGAACGGGCTCTGCATGCACT
GGTGAAAAGGGGCGCAAGCTTTGATGCCGTCTTTTTGGACCCGCCATATCGAGAGCAAAAGCTGGAAGCGCTTTTATCGA
TCATTGATGAAGCGGATATGCTGACTGAAAGAGGGTTTATTGTGGCTGAGCATGCGAAGGAAGTCATGCTGCCGGATGCG
GCGGGCGGACTTCAGCTTGCCCGGCAGGAAATATACGGCTTAACAGGCGTGACCATATACAGAAAGAGAGGGAATGGGGA
TGGCTAG

Upstream 100 bases:

>100_bases
CTATACATATGAATTTGCACTTTGGGTGTTTGTGCCAGAAAACACTTTATGATAAGATAGGAATGATTTTTTTCGAGTTT
TAAGAAAAAGTGGTGGAAGT

Downstream 100 bases:

>100_bases
CATTGCCGTTTGTCCCGGAAGTTTTGATCCGGTGACTTTTGGACATTTGGATATCATCAGGCGCGGGGCGAAAGTGTTTG
ATAAAGTTTATGTATGCGTT

Product: YlbH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRVISGTYKGRALKAVPGTSTRPTTDKVKESIFNMVGPYFEGGTGLDLYAGSGGLGIEALSRGFDRFIFVDRDFKAIQTV
KGNLKTLGLEKCAEVYRNDAERALHALVKRGASFDAVFLDPPYREQKLEALLSIIDEADMLTERGFIVAEHAKEVMLPDA
AGGLQLARQEIYGLTGVTIYRKRGNGDG

Sequences:

>Translated_188_residues
MRVISGTYKGRALKAVPGTSTRPTTDKVKESIFNMVGPYFEGGTGLDLYAGSGGLGIEALSRGFDRFIFVDRDFKAIQTV
KGNLKTLGLEKCAEVYRNDAERALHALVKRGASFDAVFLDPPYREQKLEALLSIIDEADMLTERGFIVAEHAKEVMLPDA
AGGLQLARQEIYGLTGVTIYRKRGNGDG
>Mature_188_residues
MRVISGTYKGRALKAVPGTSTRPTTDKVKESIFNMVGPYFEGGTGLDLYAGSGGLGIEALSRGFDRFIFVDRDFKAIQTV
KGNLKTLGLEKCAEVYRNDAERALHALVKRGASFDAVFLDPPYREQKLEALLSIIDEADMLTERGFIVAEHAKEVMLPDA
AGGLQLARQEIYGLTGVTIYRKRGNGDG

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=187, Percent_Identity=31.5508021390374, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20508; Mature: 20508

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVISGTYKGRALKAVPGTSTRPTTDKVKESIFNMVGPYFEGGTGLDLYAGSGGLGIEAL
CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHH
SRGFDRFIFVDRDFKAIQTVKGNLKTLGLEKCAEVYRNDAERALHALVKRGASFDAVFLD
HCCCCEEEEECCCHHHHHHHHCCHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEC
PPYREQKLEALLSIIDEADMLTERGFIVAEHAKEVMLPDAAGGLQLARQEIYGLTGVTIY
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHCCCCCCCHHHHHHHHHHCCCCEEEE
RKRGNGDG
EECCCCCC
>Mature Secondary Structure
MRVISGTYKGRALKAVPGTSTRPTTDKVKESIFNMVGPYFEGGTGLDLYAGSGGLGIEAL
CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHH
SRGFDRFIFVDRDFKAIQTVKGNLKTLGLEKCAEVYRNDAERALHALVKRGASFDAVFLD
HCCCCEEEEECCCHHHHHHHHCCHHHCCHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEC
PPYREQKLEALLSIIDEADMLTERGFIVAEHAKEVMLPDAAGGLQLARQEIYGLTGVTIY
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHCCCCCCCHHHHHHHHHHCCCCEEEE
RKRGNGDG
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]