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The map label for this gene is ykpA [H]

Identifier: 52785419

GI number: 52785419

Start: 1617981

End: 1619600

Strand: Direct

Name: ykpA [H]

Synonym: BLi01658

Alternate gene names: 52785419

Gene position: 1617981-1619600 (Clockwise)

Preceding gene: 52785416

Following gene: 52785420

Centisome position: 38.32

GC content: 46.36

Gene sequence:

>1620_bases
ATGATAGCTGTTCAAAATGTCAGCTTGCGGTTTGCAGACCAGAAGCTGTTTGAAGATGTAAATATTAAGTTTGCGCCCGG
AAACTGCTACGGATTGATCGGAGCAAACGGCGCCGGAAAGTCCACTTTTTTAAAAATATTGTCTGGCGAAATTGAGCCTC
AGACAGGCGAAGTCCATATGAGTCCTGGCGAACGTCTTGCCGTCCTGAAGCAGAACCACTTTGAGTATGAAGAGCATGAA
GTGTTGAAAGTCGTGATCATGGGACATAGACGACTTTATGAAGTCATGCAGGAAAAAGACGCGATTTACATGAAACCTGA
TTTTTCAGATGAAGACGGAATCCGCGCCGCGGAGCTTGAAGGCGAATTCGCCGAGCTGAACGGCTGGGAAGCCGAAGGGG
AAGCCGCGATCTTATTAAAAGGACTCGGCATTCCTGAAGAACTTCATACGAAGAAAATGGCAGATTTGGGCGGCTCTGAA
AAGGTGAAGGTCCTTCTTGCACAGGCCCTGTTCGGAAAACCCGACGTCCTTCTTCTCGATGAGCCGACCAACCACTTGGA
TATTCAGGCGATCCAATGGCTAGAAGAGTTTTTAATCAATTTTGAGAATACGGTTATCGTCGTATCGCATGACCGCCACT
TTTTAAATAAAGTATGTACGCATATTGCCGACCTGGATTTTAACAAGATTCAAATTTATGTCGGAAACTATGATTTCTGG
TATGAATCAAGCCAGCTTGCGCTTAAAATGGCTCAGGAAGCCAATAAGAAAAAAGAGGAGCAGATCAAACAGCTCCAAGA
GTTCGTCGCCAGATTCAGCGCCAACGCCTCAAAATCGAAGCAGGCGACATCGAGAAAAAAACTGCTTGAAAAAATTACGC
TTGACGATATTAAGCCTTCATCTCGCAAGTATCCGTATGTACATTTCGCACCTGAACGCGAAATTGGAAACGATGTGCTT
GTTGTCAAAGACCTGTCGAAAACGATCGACGGCGTCAAGGTGCTTGACTCTGTCAGCTTTATGATGAATAAAGAGGATAA
AATCGCCTTTACAGGCCGGAACGAGCTAGCCGCTACAACGCTCTTTAAAATCCTTGCCGGGGAAATGGAGCCTGACAGCG
GATCGTTTAAATGGGGCGTCACTACATCCCAAGCGTTTTTCCCGAAAGACAACAGCGAGTATTTTGAAAACAGCGATTTA
AACCTTGTCGACTGGCTCCGCCAATTTTCGCCGCATGACCAAAGTGAAAGCTTCCTGCGCGGATTTTTAGGCCGGATGCT
GTTCTCCGGAGAAGAAGTGCTGAAAAAAGCAAGCGTTTTGTCAGGGGGAGAAAAAGTCCGCTGCATGCTGTCGAAAATGA
TGCTGTCCGGCGCCAATGTGCTGATGCTTGATGAGCCGACAAACCATTTGGACCTCGAGTCCATTACAGCGCTGAATAAC
GGTTTAATCAGCTTTAAAGGCGCCATGCTGTTTACATCTCATGACCATCAGTTTGTCCAAACAATCGCCAACCGGATCAT
CGAGATCACGCCAAACGGAATCGTCGATAAACAAATGAGCTACGACGAGTTTTTGGAAGACAAAACGGTTCAGGACAAGC
TTGCTGAACTTTACGCGTAA

Upstream 100 bases:

>100_bases
ATATTTTTCTTTCAAACTTTATCGTAAAAAAGCAAAGCATTTCTCTTGCGGAATTTTCGTGTTATACTCATTTTAATGAA
GTATAGATGGAGGATATTAA

Downstream 100 bases:

>100_bases
TGATAGAAAACCCGCCTTAAAAAGCGGGTTTTTTTTTATAAAAAGGAGATGGTTGCTGTGTCATGCCGAAAGGCTCTTGA
GCAATATATTCAAGCAACAA

Product: YkpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MIAVQNVSLRFADQKLFEDVNIKFAPGNCYGLIGANGAGKSTFLKILSGEIEPQTGEVHMSPGERLAVLKQNHFEYEEHE
VLKVVIMGHRRLYEVMQEKDAIYMKPDFSDEDGIRAAELEGEFAELNGWEAEGEAAILLKGLGIPEELHTKKMADLGGSE
KVKVLLAQALFGKPDVLLLDEPTNHLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFW
YESSQLALKMAQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPSSRKYPYVHFAPEREIGNDVL
VVKDLSKTIDGVKVLDSVSFMMNKEDKIAFTGRNELAATTLFKILAGEMEPDSGSFKWGVTTSQAFFPKDNSEYFENSDL
NLVDWLRQFSPHDQSESFLRGFLGRMLFSGEEVLKKASVLSGGEKVRCMLSKMMLSGANVLMLDEPTNHLDLESITALNN
GLISFKGAMLFTSHDHQFVQTIANRIIEITPNGIVDKQMSYDEFLEDKTVQDKLAELYA

Sequences:

>Translated_539_residues
MIAVQNVSLRFADQKLFEDVNIKFAPGNCYGLIGANGAGKSTFLKILSGEIEPQTGEVHMSPGERLAVLKQNHFEYEEHE
VLKVVIMGHRRLYEVMQEKDAIYMKPDFSDEDGIRAAELEGEFAELNGWEAEGEAAILLKGLGIPEELHTKKMADLGGSE
KVKVLLAQALFGKPDVLLLDEPTNHLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFW
YESSQLALKMAQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPSSRKYPYVHFAPEREIGNDVL
VVKDLSKTIDGVKVLDSVSFMMNKEDKIAFTGRNELAATTLFKILAGEMEPDSGSFKWGVTTSQAFFPKDNSEYFENSDL
NLVDWLRQFSPHDQSESFLRGFLGRMLFSGEEVLKKASVLSGGEKVRCMLSKMMLSGANVLMLDEPTNHLDLESITALNN
GLISFKGAMLFTSHDHQFVQTIANRIIEITPNGIVDKQMSYDEFLEDKTVQDKLAELYA
>Mature_539_residues
MIAVQNVSLRFADQKLFEDVNIKFAPGNCYGLIGANGAGKSTFLKILSGEIEPQTGEVHMSPGERLAVLKQNHFEYEEHE
VLKVVIMGHRRLYEVMQEKDAIYMKPDFSDEDGIRAAELEGEFAELNGWEAEGEAAILLKGLGIPEELHTKKMADLGGSE
KVKVLLAQALFGKPDVLLLDEPTNHLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFW
YESSQLALKMAQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPSSRKYPYVHFAPEREIGNDVL
VVKDLSKTIDGVKVLDSVSFMMNKEDKIAFTGRNELAATTLFKILAGEMEPDSGSFKWGVTTSQAFFPKDNSEYFENSDL
NLVDWLRQFSPHDQSESFLRGFLGRMLFSGEEVLKKASVLSGGEKVRCMLSKMMLSGANVLMLDEPTNHLDLESITALNN
GLISFKGAMLFTSHDHQFVQTIANRIIEITPNGIVDKQMSYDEFLEDKTVQDKLAELYA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=29.7551789077213, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI27881506, Length=552, Percent_Identity=30.2536231884058, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI10947137, Length=552, Percent_Identity=30.2536231884058, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI10947135, Length=521, Percent_Identity=27.831094049904, Blast_Score=164, Evalue=3e-40,
Organism=Homo sapiens, GI69354671, Length=521, Percent_Identity=27.831094049904, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI45446740, Length=237, Percent_Identity=25.7383966244726, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI47078218, Length=237, Percent_Identity=25.7383966244726, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=45.5743879472693, Blast_Score=518, Evalue=1e-148,
Organism=Escherichia coli, GI1789751, Length=506, Percent_Identity=33.00395256917, Blast_Score=271, Evalue=1e-73,
Organism=Escherichia coli, GI2367384, Length=522, Percent_Identity=32.9501915708812, Blast_Score=246, Evalue=4e-66,
Organism=Escherichia coli, GI1787182, Length=503, Percent_Identity=29.6222664015905, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI1788450, Length=237, Percent_Identity=27.4261603375527, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI48994997, Length=219, Percent_Identity=24.6575342465753, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=26.6094420600858, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789864, Length=246, Percent_Identity=23.9837398373984, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1789891, Length=221, Percent_Identity=24.4343891402715, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790525, Length=226, Percent_Identity=26.9911504424779, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=517, Percent_Identity=28.8201160541586, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17553372, Length=521, Percent_Identity=29.9424184261036, Blast_Score=218, Evalue=5e-57,
Organism=Caenorhabditis elegans, GI17559834, Length=560, Percent_Identity=28.2142857142857, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17558664, Length=217, Percent_Identity=27.6497695852535, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115533592, Length=214, Percent_Identity=24.7663551401869, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=523, Percent_Identity=32.3135755258126, Blast_Score=247, Evalue=4e-66,
Organism=Saccharomyces cerevisiae, GI6321121, Length=514, Percent_Identity=29.9610894941634, Blast_Score=215, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6325030, Length=377, Percent_Identity=25.1989389920424, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6324314, Length=367, Percent_Identity=25.8855585831063, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323278, Length=368, Percent_Identity=24.4565217391304, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24666836, Length=516, Percent_Identity=30.2325581395349, Blast_Score=244, Evalue=8e-65,
Organism=Drosophila melanogaster, GI24642252, Length=516, Percent_Identity=28.4883720930233, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI18859989, Length=516, Percent_Identity=28.4883720930233, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24641342, Length=555, Percent_Identity=28.1081081081081, Blast_Score=205, Evalue=7e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60830; Mature: 60830

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVQNVSLRFADQKLFEDVNIKFAPGNCYGLIGANGAGKSTFLKILSGEIEPQTGEVHM
CEEEEECEEEEHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEE
SPGERLAVLKQNHFEYEEHEVLKVVIMGHRRLYEVMQEKDAIYMKPDFSDEDGIRAAELE
CCCCEEEEEHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCCCCEEEECC
GEFAELNGWEAEGEAAILLKGLGIPEELHTKKMADLGGSEKVKVLLAQALFGKPDVLLLD
CCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEE
EPTNHLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALKMAQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPS
ECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SRKYPYVHFAPEREIGNDVLVVKDLSKTIDGVKVLDSVSFMMNKEDKIAFTGRNELAATT
CCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH
LFKILAGEMEPDSGSFKWGVTTSQAFFPKDNSEYFENSDLNLVDWLRQFSPHDQSESFLR
HHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHH
GFLGRMLFSGEEVLKKASVLSGGEKVRCMLSKMMLSGANVLMLDEPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLISFKGAMLFTSHDHQFVQTIANRIIEITPNGIVDKQMSYDEFLEDKTVQDKLAELYA
CEEEECCEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MIAVQNVSLRFADQKLFEDVNIKFAPGNCYGLIGANGAGKSTFLKILSGEIEPQTGEVHM
CEEEEECEEEEHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEE
SPGERLAVLKQNHFEYEEHEVLKVVIMGHRRLYEVMQEKDAIYMKPDFSDEDGIRAAELE
CCCCEEEEEHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCCCCEEEECC
GEFAELNGWEAEGEAAILLKGLGIPEELHTKKMADLGGSEKVKVLLAQALFGKPDVLLLD
CCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEE
EPTNHLDIQAIQWLEEFLINFENTVIVVSHDRHFLNKVCTHIADLDFNKIQIYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALKMAQEANKKKEEQIKQLQEFVARFSANASKSKQATSRKKLLEKITLDDIKPS
ECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SRKYPYVHFAPEREIGNDVLVVKDLSKTIDGVKVLDSVSFMMNKEDKIAFTGRNELAATT
CCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH
LFKILAGEMEPDSGSFKWGVTTSQAFFPKDNSEYFENSDLNLVDWLRQFSPHDQSESFLR
HHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHH
GFLGRMLFSGEEVLKKASVLSGGEKVRCMLSKMMLSGANVLMLDEPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLISFKGAMLFTSHDHQFVQTIANRIIEITPNGIVDKQMSYDEFLEDKTVQDKLAELYA
CEEEECCEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]