Click here to switch to the map view.

The map label for this gene is 52785311

Identifier: 52785311

GI number: 52785311

Start: 1516279

End: 1516602

Strand: Direct

Name: 52785311

Synonym: BLi01547

Alternate gene names: NA

Gene position: 1516279-1516602 (Clockwise)

Preceding gene: 52785310

Following gene: 52785312

Centisome position: 35.91

GC content: 45.99

Gene sequence:

>324_bases
ATGGCGGTACCGACAGCGAAAAAAATCCGGGAATACCTCGGAGACAGGTATAAAGAATCGGATGAAGAACTGATCGAACT
CTACGTTGACACTCATAAGTTTTACCGCCGACTAAAAAAGGAAGTAGCCGAGAACCCTTTAATGATGCGGCATACGAACA
AAGCAGGCGCGGAGAACCTTGTCAAAAATCCGTTAGCGATTGAGCTTACGAAGACGGTGACGACGTTAAACAATCTTCTG
AAATCGCTCGATCTTACGCCGGCTCAAAGAAAAGAATTAAACGCGGGCGGTGAAGAAAATGACGACGGTTTCGATCAGCT
CTAA

Upstream 100 bases:

>100_bases
AAAAACAAAAATACAAGGGACCGGCGGGCCCCCTTCGCTTGTTGCGCGACCAGAAATTTTACATTAAAGGGGGGTCTCCC
CGAATGAAAGGAGTGTTTTA

Downstream 100 bases:

>100_bases
CCCGACAGACATCGAAAAATGGTATAAAAACTGGCTAAAAACGCAAAAAATAGCCGGATTTATACGCGAAAAACCGGCGG
AAAAGTTGCTTACAACATGG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Related Terminase Small Subunit

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MAVPTAKKIREYLGDRYKESDEELIELYVDTHKFYRRLKKEVAENPLMMRHTNKAGAENLVKNPLAIELTKTVTTLNNLL
KSLDLTPAQRKELNAGGEENDDGFDQL

Sequences:

>Translated_107_residues
MAVPTAKKIREYLGDRYKESDEELIELYVDTHKFYRRLKKEVAENPLMMRHTNKAGAENLVKNPLAIELTKTVTTLNNLL
KSLDLTPAQRKELNAGGEENDDGFDQL
>Mature_106_residues
AVPTAKKIREYLGDRYKESDEELIELYVDTHKFYRRLKKEVAENPLMMRHTNKAGAENLVKNPLAIELTKTVTTLNNLLK
SLDLTPAQRKELNAGGEENDDGFDQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12262; Mature: 12131

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPTAKKIREYLGDRYKESDEELIELYVDTHKFYRRLKKEVAENPLMMRHTNKAGAENL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHH
VKNPLAIELTKTVTTLNNLLKSLDLTPAQRKELNAGGEENDDGFDQL
HCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVPTAKKIREYLGDRYKESDEELIELYVDTHKFYRRLKKEVAENPLMMRHTNKAGAENL
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHH
VKNPLAIELTKTVTTLNNLLKSLDLTPAQRKELNAGGEENDDGFDQL
HCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA