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The map label for this gene is ymfN [H]

Identifier: 52785312

GI number: 52785312

Start: 1516577

End: 1518358

Strand: Direct

Name: ymfN [H]

Synonym: BLi01548

Alternate gene names: 52785312

Gene position: 1516577-1518358 (Clockwise)

Preceding gene: 52785311

Following gene: 52785313

Centisome position: 35.92

GC content: 45.74

Gene sequence:

>1782_bases
ATGACGACGGTTTCGATCAGCTCTAACCCGACAGACATCGAAAAATGGTATAAAAACTGGCTAAAAACGCAAAAAATAGC
CGGATTTATACGCGAAAAACCGGCGGAAAAGTTGCTTACAACATGGTATGCGGAAAAAGTAGTCTCCGGGGAGATAATCG
CAAGTAAGAAAAATATTCTCGCTTGTAAACGACATCTTCGCGATTTAAAACGCGCAGGAACAGACGAATTTCCATACGTT
TTTAACGAAGAAAAAGGGCATCGCCCCATACAGTTTATCGAGAAGTTTTGTAAACCGTCTCAAGGACAATACAACAGTTT
GACGCTTCAACCGTGGCAACATTTTGTGATCGGATCACTGTACGGTTGGGTTCATCGCGATACCGGCCTTCGGAGATTCC
GTGAAGGCCTTGTTTTTGTTGCGCGGAAGAACGGAAAAACAACGAAAATCAGCGGTTTAGCCAATTTTGCGATAACAAAG
GACGACGAACCGGGCGCTCGGGCCTACGTCTTAGCAAACTCGAAGCAACAAGCGGGTGTTTTATTCGAGGAAAGTCGTGC
AATGGTTCAGAAGTCGCCGGTACTTCGGAAGCGTCTGCGCGAGAATCAAAAAGGCATCTACCATGACGCGTCCATGAGTC
AGATCGAGGCACGGGCGTCTGATAGCGAAAAGTTAGACGGTTTGAATACGCACCTCGGCATATTCGATGAGATACACGAA
TTCAAAGATTCAAAATTGATCAGCGTAATCAAGAACTCAAGGGCAGCTCGACGGCAGCCGTTGATCATCTACATCACGAC
GGCCGGCTATCAACTCGACGGGCCTCTCGTCGAATATTACGAAATTGCTTCCGATGTTTTGGACGGATCTAACGTTCAGG
AGCGGAATTTTTACTTTATGGCCGAATTAGACGACATTTCTGAGGTGGAAAACCCGGAAATGTGGATCAAAGCGAACCCT
AACATTGGGGTAACGATGGATATTCCGTCAATGATTCAGGACTTCAATGCGGACCGTCACGTCCCTCGTGAATACAACGA
CTGGCTGGTCAAACGGTTTAATATCTTCGTGGATAACGGAGAGGAAAGCTTCATAGACTTCGAAGTCATCAAGAGCAATA
ACGGACATGTCGATCCGGAATCGTTGCGTGGTATGAGATGCATTGGCGGCTTCGACTTATCACAAACGGAAGACTTTACA
AGCGCGTGTCTGGAGTTTTTGCTGCCGGATAATCGCGTTTTTGTTATGTCTCATTCGTGGGTACCGGCGGCAAAAGTACA
AAAAGATAACGAAAAAATCGACTACCGTGGGTTTGAAGCCGACGGTTTTTTGACGATTATACCCGGAAATTACGTTCAGT
ACGAGTACGTTTACGACTGGTTCGTTGAAATGTCGCGTAAATATCAGATCGATAAGATCACGTTTGACCCAGCGAATGCG
ATGCGATTGGTTCACGATCTTCAAAACTACGGATTTCAAACCGAAGTTGTGCGACAAGGGTACATTACTCTGAGTGACCC
GTTAAAGCATATCAAAGAATTATTGCTTGACGGAAACGTCGTTTACAACGAAAACAAGCTTTTCACATGGTATCTAAACA
ACGTCAAGCTCGTCGAAGATCGGAACGGTAACTGGTTGCCGACTAAACAAACGAGGTACCGGAAAATCGATGGCTTTGCG
GCTTTTCTGAACGCACATACACAGGTTTATCTCGATATGACGAAGCCGGTTGAGGGCGGAAGCGTCGGATTTATCTCAAT
TAGCGATCTATTAAACGGTTAG

Upstream 100 bases:

>100_bases
ATTGAGCTTACGAAGACGGTGACGACGTTAAACAATCTTCTGAAATCGCTCGATCTTACGCCGGCTCAAAGAAAAGAATT
AAACGCGGGCGGTGAAGAAA

Downstream 100 bases:

>100_bases
GAGGTGAGAAATTGGGCTTTTGGAGCAATGTTCGGAACTTTTTTCGCAAGCCATCCGATGTCAAGGCAGAAACGAGAAGG
GATCTAACACACTGGTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MTTVSISSNPTDIEKWYKNWLKTQKIAGFIREKPAEKLLTTWYAEKVVSGEIIASKKNILACKRHLRDLKRAGTDEFPYV
FNEEKGHRPIQFIEKFCKPSQGQYNSLTLQPWQHFVIGSLYGWVHRDTGLRRFREGLVFVARKNGKTTKISGLANFAITK
DDEPGARAYVLANSKQQAGVLFEESRAMVQKSPVLRKRLRENQKGIYHDASMSQIEARASDSEKLDGLNTHLGIFDEIHE
FKDSKLISVIKNSRAARRQPLIIYITTAGYQLDGPLVEYYEIASDVLDGSNVQERNFYFMAELDDISEVENPEMWIKANP
NIGVTMDIPSMIQDFNADRHVPREYNDWLVKRFNIFVDNGEESFIDFEVIKSNNGHVDPESLRGMRCIGGFDLSQTEDFT
SACLEFLLPDNRVFVMSHSWVPAAKVQKDNEKIDYRGFEADGFLTIIPGNYVQYEYVYDWFVEMSRKYQIDKITFDPANA
MRLVHDLQNYGFQTEVVRQGYITLSDPLKHIKELLLDGNVVYNENKLFTWYLNNVKLVEDRNGNWLPTKQTRYRKIDGFA
AFLNAHTQVYLDMTKPVEGGSVGFISISDLLNG

Sequences:

>Translated_593_residues
MTTVSISSNPTDIEKWYKNWLKTQKIAGFIREKPAEKLLTTWYAEKVVSGEIIASKKNILACKRHLRDLKRAGTDEFPYV
FNEEKGHRPIQFIEKFCKPSQGQYNSLTLQPWQHFVIGSLYGWVHRDTGLRRFREGLVFVARKNGKTTKISGLANFAITK
DDEPGARAYVLANSKQQAGVLFEESRAMVQKSPVLRKRLRENQKGIYHDASMSQIEARASDSEKLDGLNTHLGIFDEIHE
FKDSKLISVIKNSRAARRQPLIIYITTAGYQLDGPLVEYYEIASDVLDGSNVQERNFYFMAELDDISEVENPEMWIKANP
NIGVTMDIPSMIQDFNADRHVPREYNDWLVKRFNIFVDNGEESFIDFEVIKSNNGHVDPESLRGMRCIGGFDLSQTEDFT
SACLEFLLPDNRVFVMSHSWVPAAKVQKDNEKIDYRGFEADGFLTIIPGNYVQYEYVYDWFVEMSRKYQIDKITFDPANA
MRLVHDLQNYGFQTEVVRQGYITLSDPLKHIKELLLDGNVVYNENKLFTWYLNNVKLVEDRNGNWLPTKQTRYRKIDGFA
AFLNAHTQVYLDMTKPVEGGSVGFISISDLLNG
>Mature_592_residues
TTVSISSNPTDIEKWYKNWLKTQKIAGFIREKPAEKLLTTWYAEKVVSGEIIASKKNILACKRHLRDLKRAGTDEFPYVF
NEEKGHRPIQFIEKFCKPSQGQYNSLTLQPWQHFVIGSLYGWVHRDTGLRRFREGLVFVARKNGKTTKISGLANFAITKD
DEPGARAYVLANSKQQAGVLFEESRAMVQKSPVLRKRLRENQKGIYHDASMSQIEARASDSEKLDGLNTHLGIFDEIHEF
KDSKLISVIKNSRAARRQPLIIYITTAGYQLDGPLVEYYEIASDVLDGSNVQERNFYFMAELDDISEVENPEMWIKANPN
IGVTMDIPSMIQDFNADRHVPREYNDWLVKRFNIFVDNGEESFIDFEVIKSNNGHVDPESLRGMRCIGGFDLSQTEDFTS
ACLEFLLPDNRVFVMSHSWVPAAKVQKDNEKIDYRGFEADGFLTIIPGNYVQYEYVYDWFVEMSRKYQIDKITFDPANAM
RLVHDLQNYGFQTEVVRQGYITLSDPLKHIKELLLDGNVVYNENKLFTWYLNNVKLVEDRNGNWLPTKQTRYRKIDGFAA
FLNAHTQVYLDMTKPVEGGSVGFISISDLLNG

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 68294; Mature: 68163

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVSISSNPTDIEKWYKNWLKTQKIAGFIREKPAEKLLTTWYAEKVVSGEIIASKKNIL
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEECCHHHH
ACKRHLRDLKRAGTDEFPYVFNEEKGHRPIQFIEKFCKPSQGQYNSLTLQPWQHFVIGSL
HHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHH
YGWVHRDTGLRRFREGLVFVARKNGKTTKISGLANFAITKDDEPGARAYVLANSKQQAGV
HHHHHCCHHHHHHHCCEEEEEECCCCEEEEECEEEEEEECCCCCCCEEEEEECCCCCCCE
LFEESRAMVQKSPVLRKRLRENQKGIYHDASMSQIEARASDSEKLDGLNTHLGIFDEIHE
EEHHHHHHHHCCHHHHHHHHHCCCCCEECCCHHHHHHHCCCCHHCCCCCCCHHHHHHHHH
FKDSKLISVIKNSRAARRQPLIIYITTAGYQLDGPLVEYYEIASDVLDGSNVQERNFYFM
HCCCHHHHHHHCCHHHHCCCEEEEEEECCEEECCCHHHHHHHHHHHCCCCCCCCCCEEEE
AELDDISEVENPEMWIKANPNIGVTMDIPSMIQDFNADRHVPREYNDWLVKRFNIFVDNG
EECCCHHCCCCCCEEEEECCCEEEEECCHHHHHHCCCCCCCCCHHHHHHEEEEEEEEECC
EESFIDFEVIKSNNGHVDPESLRGMRCIGGFDLSQTEDFTSACLEFLLPDNRVFVMSHSW
CCCEEEEEEEECCCCCCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
VPAAKVQKDNEKIDYRGFEADGFLTIIPGNYVQYEYVYDWFVEMSRKYQIDKITFDPANA
CCHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCCEEEEEEEECCHHH
MRLVHDLQNYGFQTEVVRQGYITLSDPLKHIKELLLDGNVVYNENKLFTWYLNNVKLVED
HHHHHHHHHCCCEEEHHHCCCEEEHHHHHHHHHHHHCCCEEEECCEEEEEEECCEEEEEC
RNGNWLPTKQTRYRKIDGFAAFLNAHTQVYLDMTKPVEGGSVGFISISDLLNG
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEHHHHHCC
>Mature Secondary Structure 
TTVSISSNPTDIEKWYKNWLKTQKIAGFIREKPAEKLLTTWYAEKVVSGEIIASKKNIL
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEECCHHHH
ACKRHLRDLKRAGTDEFPYVFNEEKGHRPIQFIEKFCKPSQGQYNSLTLQPWQHFVIGSL
HHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHH
YGWVHRDTGLRRFREGLVFVARKNGKTTKISGLANFAITKDDEPGARAYVLANSKQQAGV
HHHHHCCHHHHHHHCCEEEEEECCCCEEEEECEEEEEEECCCCCCCEEEEEECCCCCCCE
LFEESRAMVQKSPVLRKRLRENQKGIYHDASMSQIEARASDSEKLDGLNTHLGIFDEIHE
EEHHHHHHHHCCHHHHHHHHHCCCCCEECCCHHHHHHHCCCCHHCCCCCCCHHHHHHHHH
FKDSKLISVIKNSRAARRQPLIIYITTAGYQLDGPLVEYYEIASDVLDGSNVQERNFYFM
HCCCHHHHHHHCCHHHHCCCEEEEEEECCEEECCCHHHHHHHHHHHCCCCCCCCCCEEEE
AELDDISEVENPEMWIKANPNIGVTMDIPSMIQDFNADRHVPREYNDWLVKRFNIFVDNG
EECCCHHCCCCCCEEEEECCCEEEEECCHHHHHHCCCCCCCCCHHHHHHEEEEEEEEECC
EESFIDFEVIKSNNGHVDPESLRGMRCIGGFDLSQTEDFTSACLEFLLPDNRVFVMSHSW
CCCEEEEEEEECCCCCCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
VPAAKVQKDNEKIDYRGFEADGFLTIIPGNYVQYEYVYDWFVEMSRKYQIDKITFDPANA
CCHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCCEEEEEEEECCHHH
MRLVHDLQNYGFQTEVVRQGYITLSDPLKHIKELLLDGNVVYNENKLFTWYLNNVKLVED
HHHHHHHHHCCCEEEHHHCCCEEEHHHHHHHHHHHHCCCEEEECCEEEEEEECCEEEEEC
RNGNWLPTKQTRYRKIDGFAAFLNAHTQVYLDMTKPVEGGSVGFISISDLLNG
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]