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The map label for this gene is ykjA [H]

Identifier: 52785171

GI number: 52785171

Start: 1401714

End: 1402574

Strand: Direct

Name: ykjA [H]

Synonym: BLi01403

Alternate gene names: 52785171

Gene position: 1401714-1402574 (Clockwise)

Preceding gene: 52785170

Following gene: 52785172

Centisome position: 33.2

GC content: 42.62

Gene sequence:

>861_bases
TTGGTAAACATACGAACAAAACCCCGGCTCAAGCATCAGTTTGCCGGGGTTTTGCTGTGCAATGAATACACTACCCAATA
TTTGTTCAAAATAAATTACAAAAAACGGAAAGAAGTTTTGGGTGAAATGCTTGAATTTGTATGGACTTTTTTAGCCAAGC
CTGCTTTAGTGTTCTCTATAGCTTATATTCTTTTCCGAATCGCAGGGAAGAAAGCCGTTTCGCAAATGACGAACTTCGAC
CTTTTGCTGACATTTGCGATTGGAACGATCATCAGCGAACCGATTCTTACTTCTAAAATTTCAATGTCCATTTATTACGC
GCTTACCTTTCTGATCTTCTATTTGTTGATTGAAAAGCTGTCATTACACAATAAATGGCGATGGTTTCTTGTCGTCAGTC
CGACCGTGCTGATCCGAAACGGCAATATTGATAAAGGAGGATTAAAAAGAGAGCGGCTGACTGTCAATGAACTGCTCGGC
AAATTGCGCGAAAAAGGCTATGCCGACCCAAAAGATATCGACCTCGCCCTGATTGAAGAATCGGGCCAGATCAGCGTGAT
TCCCAAATCGGAAGCAAGGCCTGTACAGCCGCGGGACCTCAACTTGGAGACGAAGCGGAATTTCGTGCCGATTCCGCTCA
TTTTAGACGGCGAAATTATCGAACACAATTTAAAATACTTGAAAAAAACGAAAGAATGGCTGTTTCAAAAATTAGAGGAT
AAAGGGATTGAGCAAGCGATGCTGCCAACCATTACGCTCGGCACCTTGAACGAAAAAAATGAAATTATAATTGATACGGA
AGATCCCGGCAGCCCGTTAACCCATGACCCGTATCTCTATAAACCGGGGCAAGACCATTAA

Upstream 100 bases:

>100_bases
AAATCATGCTGCACGAGACCGCCCGGCAGCGCGCCGAAGAACGGAAAAACCATCGCAAACACAGCAAAGCGCTGGCCCAG
GCGCTGGCTGTTGACAAACC

Downstream 100 bases:

>100_bases
TTTTCGCCGAATAGGCGATTTTTTTATTTCCTGCTATTTCAGAAAAATATTAAGAGTCTGTTTTTTTATTCGTTGATAAA
AATGAACAGGGCATTTGTCA

Product: YkjA

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MVNIRTKPRLKHQFAGVLLCNEYTTQYLFKINYKKRKEVLGEMLEFVWTFLAKPALVFSIAYILFRIAGKKAVSQMTNFD
LLLTFAIGTIISEPILTSKISMSIYYALTFLIFYLLIEKLSLHNKWRWFLVVSPTVLIRNGNIDKGGLKRERLTVNELLG
KLREKGYADPKDIDLALIEESGQISVIPKSEARPVQPRDLNLETKRNFVPIPLILDGEIIEHNLKYLKKTKEWLFQKLED
KGIEQAMLPTITLGTLNEKNEIIIDTEDPGSPLTHDPYLYKPGQDH

Sequences:

>Translated_286_residues
MVNIRTKPRLKHQFAGVLLCNEYTTQYLFKINYKKRKEVLGEMLEFVWTFLAKPALVFSIAYILFRIAGKKAVSQMTNFD
LLLTFAIGTIISEPILTSKISMSIYYALTFLIFYLLIEKLSLHNKWRWFLVVSPTVLIRNGNIDKGGLKRERLTVNELLG
KLREKGYADPKDIDLALIEESGQISVIPKSEARPVQPRDLNLETKRNFVPIPLILDGEIIEHNLKYLKKTKEWLFQKLED
KGIEQAMLPTITLGTLNEKNEIIIDTEDPGSPLTHDPYLYKPGQDH
>Mature_286_residues
MVNIRTKPRLKHQFAGVLLCNEYTTQYLFKINYKKRKEVLGEMLEFVWTFLAKPALVFSIAYILFRIAGKKAVSQMTNFD
LLLTFAIGTIISEPILTSKISMSIYYALTFLIFYLLIEKLSLHNKWRWFLVVSPTVLIRNGNIDKGGLKRERLTVNELLG
KLREKGYADPKDIDLALIEESGQISVIPKSEARPVQPRDLNLETKRNFVPIPLILDGEIIEHNLKYLKKTKEWLFQKLED
KGIEQAMLPTITLGTLNEKNEIIIDTEDPGSPLTHDPYLYKPGQDH

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 32979; Mature: 32979

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNIRTKPRLKHQFAGVLLCNEYTTQYLFKINYKKRKEVLGEMLEFVWTFLAKPALVFSI
CCCCCCCCCHHHHHCCEEEECHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYILFRIAGKKAVSQMTNFDLLLTFAIGTIISEPILTSKISMSIYYALTFLIFYLLIEKL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLHNKWRWFLVVSPTVLIRNGNIDKGGLKRERLTVNELLGKLREKGYADPKDIDLALIEE
HCCCCEEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
SGQISVIPKSEARPVQPRDLNLETKRNFVPIPLILDGEIIEHNLKYLKKTKEWLFQKLED
CCEEEEEECCCCCCCCCCCCCCCCCCCEEECEEEECCHHHHHHHHHHHHHHHHHHHHHHH
KGIEQAMLPTITLGTLNEKNEIIIDTEDPGSPLTHDPYLYKPGQDH
CCCHHHHCCEEEEECCCCCCCEEEECCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MVNIRTKPRLKHQFAGVLLCNEYTTQYLFKINYKKRKEVLGEMLEFVWTFLAKPALVFSI
CCCCCCCCCHHHHHCCEEEECHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYILFRIAGKKAVSQMTNFDLLLTFAIGTIISEPILTSKISMSIYYALTFLIFYLLIEKL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLHNKWRWFLVVSPTVLIRNGNIDKGGLKRERLTVNELLGKLREKGYADPKDIDLALIEE
HCCCCEEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
SGQISVIPKSEARPVQPRDLNLETKRNFVPIPLILDGEIIEHNLKYLKKTKEWLFQKLED
CCEEEEEECCCCCCCCCCCCCCCCCCCEEECEEEECCHHHHHHHHHHHHHHHHHHHHHHH
KGIEQAMLPTITLGTLNEKNEIIIDTEDPGSPLTHDPYLYKPGQDH
CCCHHHHCCEEEEECCCCCCCEEEECCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]