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The map label for this gene is dppA [H]

Identifier: 52785160

GI number: 52785160

Start: 1390597

End: 1391421

Strand: Direct

Name: dppA [H]

Synonym: BLi01392

Alternate gene names: 52785160

Gene position: 1390597-1391421 (Clockwise)

Preceding gene: 52785159

Following gene: 52785161

Centisome position: 32.93

GC content: 53.58

Gene sequence:

>825_bases
GTGAAGCTGTATATGTCTGTTGATATGGAGGGGATTTCCGGGCTTCCGGATGATACGTTCGTCGATTCAAGCAAGCCGAA
CTATGAGAGAGGCCGGAAGATCATGACGGACGAGGCCAATCATGTGATTGACGAAGCGTTCAAAAATGGATGCAGAGAGG
TGATTGTTAATGACAGCCACTCTAAAATGAACAACCTGTTAATTGAGAGGCTCCATCCTGAAGCGCGGCTTATTTCGGGA
GATGTCAAGCCGTTTTCGATGGTTCAGGGGCTTGATGATACATACGACGGAGCCGTGTTCGTCGGCTACCATGCGAGAGC
GTCGATGAGAGGCGTGATGTCGCACAGCATGATTTTCGGCGTCAGACATTTTTACATCAACGATCAGGCGGTCGGCGAGC
TGGGGTTCAACGCCTATGTTGCCGGTTATTACGGCGTCCCGGTCATCATGGCTGCCGGTGACAGCGAGGCGGCAGCTGAG
GCGGAGGAGCTGATTCCGAACGTAACGACAGCAGCCGTCAAAGAAACGGTCTCCCGTTCGGCGGTCAAATGTCTGACGCC
GGAGAAAGCGGGGCGGCTATTAAGAGAACGGATGGCATATGCGATTCAAAACCGCGGTCAAGTCAAGCCGCTCACACCTC
CGGACAGGCCGGTGCTGCGGATAGAATTTGCCAATTACGGCCAAGCCGAGTGGGCCAGTCTGATGCCGGGTGCTGAAATC
GAACCGCAAACGACGACTGTCCGCTATCAAGCGAAAGACATTCTTGAAGCCTATCAAGCGATGCTTGTCATGACCGAGCT
TGCGATGAGAACGACATTCTCCTAG

Upstream 100 bases:

>100_bases
TACCAATTGTTATTGCATTTCTATTAAAATTCTAATATAATTTGTTAGAATATTCCCAAAATAATAAAAAATTTGAGACG
TTTTTAAGGGGTGGTTTTTT

Downstream 100 bases:

>100_bases
GAAGGTGGGATGAAAATGGCGGGTTACATCATGAAGCGGCTGCTGTGGATGCTGGCAACCATTTTGGTGATCACGACATT
GACCTTTGTGATGATGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKLYMSVDMEGISGLPDDTFVDSSKPNYERGRKIMTDEANHVIDEAFKNGCREVIVNDSHSKMNNLLIERLHPEARLISG
DVKPFSMVQGLDDTYDGAVFVGYHARASMRGVMSHSMIFGVRHFYINDQAVGELGFNAYVAGYYGVPVIMAAGDSEAAAE
AEELIPNVTTAAVKETVSRSAVKCLTPEKAGRLLRERMAYAIQNRGQVKPLTPPDRPVLRIEFANYGQAEWASLMPGAEI
EPQTTTVRYQAKDILEAYQAMLVMTELAMRTTFS

Sequences:

>Translated_274_residues
MKLYMSVDMEGISGLPDDTFVDSSKPNYERGRKIMTDEANHVIDEAFKNGCREVIVNDSHSKMNNLLIERLHPEARLISG
DVKPFSMVQGLDDTYDGAVFVGYHARASMRGVMSHSMIFGVRHFYINDQAVGELGFNAYVAGYYGVPVIMAAGDSEAAAE
AEELIPNVTTAAVKETVSRSAVKCLTPEKAGRLLRERMAYAIQNRGQVKPLTPPDRPVLRIEFANYGQAEWASLMPGAEI
EPQTTTVRYQAKDILEAYQAMLVMTELAMRTTFS
>Mature_274_residues
MKLYMSVDMEGISGLPDDTFVDSSKPNYERGRKIMTDEANHVIDEAFKNGCREVIVNDSHSKMNNLLIERLHPEARLISG
DVKPFSMVQGLDDTYDGAVFVGYHARASMRGVMSHSMIFGVRHFYINDQAVGELGFNAYVAGYYGVPVIMAAGDSEAAAE
AEELIPNVTTAAVKETVSRSAVKCLTPEKAGRLLRERMAYAIQNRGQVKPLTPPDRPVLRIEFANYGQAEWASLMPGAEI
EPQTTTVRYQAKDILEAYQAMLVMTELAMRTTFS

Specific function: Hydrolyzes N-terminal residues in D-amino acid containing peptides. Among the tested substrates, the highest activities are with D-Ala-D-Ala and D-Ala-Gly-Gly. The physiological role is not clear [H]

COG id: COG2362

COG function: function code E; D-aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M55 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007035 [H]

Pfam domain/function: PF04951 Peptidase_M55 [H]

EC number: NA

Molecular weight: Translated: 30385; Mature: 30385

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYMSVDMEGISGLPDDTFVDSSKPNYERGRKIMTDEANHVIDEAFKNGCREVIVNDSH
CEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCEECCCCHHHHHHHHHHCCCCEEEECCCH
SKMNNLLIERLHPEARLISGDVKPFSMVQGLDDTYDGAVFVGYHARASMRGVMSHSMIFG
HHHHHHHHHHHCCCHHEECCCCCHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
VRHFYINDQAVGELGFNAYVAGYYGVPVIMAAGDSEAAAEAEELIPNVTTAAVKETVSRS
HHHEEECCHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHH
AVKCLTPEKAGRLLRERMAYAIQNRGQVKPLTPPDRPVLRIEFANYGQAEWASLMPGAEI
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCC
EPQTTTVRYQAKDILEAYQAMLVMTELAMRTTFS
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLYMSVDMEGISGLPDDTFVDSSKPNYERGRKIMTDEANHVIDEAFKNGCREVIVNDSH
CEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCEECCCCHHHHHHHHHHCCCCEEEECCCH
SKMNNLLIERLHPEARLISGDVKPFSMVQGLDDTYDGAVFVGYHARASMRGVMSHSMIFG
HHHHHHHHHHHCCCHHEECCCCCHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
VRHFYINDQAVGELGFNAYVAGYYGVPVIMAAGDSEAAAEAEELIPNVTTAAVKETVSRS
HHHEEECCHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHH
AVKCLTPEKAGRLLRERMAYAIQNRGQVKPLTPPDRPVLRIEFANYGQAEWASLMPGAEI
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCC
EPQTTTVRYQAKDILEAYQAMLVMTELAMRTTFS
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]