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The map label for this gene is dppB [H]

Identifier: 52785161

GI number: 52785161

Start: 1391452

End: 1392363

Strand: Direct

Name: dppB [H]

Synonym: BLi01393

Alternate gene names: 52785161

Gene position: 1391452-1392363 (Clockwise)

Preceding gene: 52785160

Following gene: 52785162

Centisome position: 32.95

GC content: 49.01

Gene sequence:

>912_bases
ATGAAGCGGCTGCTGTGGATGCTGGCAACCATTTTGGTGATCACGACATTGACCTTTGTGATGATGAAAGTGATTCCGGG
CTCTCCCTTCAATGAAGAAAGAAATACGAACGAAGCGGTTCAGCGCAACCTTGAGGCTTACTATCAGCTGGATGAGCCTC
TCTTTGTTCAATATTTGTACTATGTAAAGTCGATCGTTACCTTTGATTTCGGGCCGTCGATCAAGCAGCCTTCGCAAAGC
GTGAACGACTTGCTGTCAAGAGGATTTCCCGTTTCGTTTGAGCTGGGGATGACGGCGCTTATTGTGGCGGTCATTTCCGG
AATCGCACTCGGAATCTTTGCTGCGCTGCGGCAAAACGGCATCATCGACTATATAGCGATGACCATTGCCGTACTCGGCA
TTTCGGTTCCCAACTTTATTATGGCAACCTTGCTGATACAGCAATTTGCCGTTAATTGGAACATATTCCCTCCGTCGACA
TGGACGAGCCCGCTTCATATGGTGCTTCCGACTGCGGCTTTGGCGATGGGGCCGCTGGCGATTATCGCAAGGCTGACCCG
ATCCAGCATGATCGAAGTGCTGACGCAGGATTATATCCGAACAGCCCGGGCTAAAGGGCTTTCCCCTTTTAAAATTGTCA
TGAAGCACGCCCTGAAAAACGCCCTTATGCCTGTTGTAACGATTCTCGGGACGCTTACCGCTGCGATTTTAACGGGGAGC
TTCGTCATCGAAAAAATCTTTGCGATTCCGGGCATGGGAAAATATTTTGTTGAAAGCATCAACTCCCGCGATTACCCCGT
GATTATGGGCACCACCGTTTTTTACAGCATCATCCTCATCATCATGTTGTTTCTCGTTGACATGGCCTACGGAATACTGG
ATCCGCGTATTAAACTGCATAAGAAAGGGTGA

Upstream 100 bases:

>100_bases
AGACATTCTTGAAGCCTATCAAGCGATGCTTGTCATGACCGAGCTTGCGATGAGAACGACATTCTCCTAGGAAGGTGGGA
TGAAAATGGCGGGTTACATC

Downstream 100 bases:

>100_bases
GCTTATGAGCCTTCCAGTCCGCACAGAAAAAGAAGCGTCTTCAGGCAGTGATATCCCTGTTGAATGGTTTGCCCCGCTGA
AACAGAAGCAGGATGAGCGT

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKRLLWMLATILVITTLTFVMMKVIPGSPFNEERNTNEAVQRNLEAYYQLDEPLFVQYLYYVKSIVTFDFGPSIKQPSQS
VNDLLSRGFPVSFELGMTALIVAVISGIALGIFAALRQNGIIDYIAMTIAVLGISVPNFIMATLLIQQFAVNWNIFPPST
WTSPLHMVLPTAALAMGPLAIIARLTRSSMIEVLTQDYIRTARAKGLSPFKIVMKHALKNALMPVVTILGTLTAAILTGS
FVIEKIFAIPGMGKYFVESINSRDYPVIMGTTVFYSIILIIMLFLVDMAYGILDPRIKLHKKG

Sequences:

>Translated_303_residues
MKRLLWMLATILVITTLTFVMMKVIPGSPFNEERNTNEAVQRNLEAYYQLDEPLFVQYLYYVKSIVTFDFGPSIKQPSQS
VNDLLSRGFPVSFELGMTALIVAVISGIALGIFAALRQNGIIDYIAMTIAVLGISVPNFIMATLLIQQFAVNWNIFPPST
WTSPLHMVLPTAALAMGPLAIIARLTRSSMIEVLTQDYIRTARAKGLSPFKIVMKHALKNALMPVVTILGTLTAAILTGS
FVIEKIFAIPGMGKYFVESINSRDYPVIMGTTVFYSIILIIMLFLVDMAYGILDPRIKLHKKG
>Mature_303_residues
MKRLLWMLATILVITTLTFVMMKVIPGSPFNEERNTNEAVQRNLEAYYQLDEPLFVQYLYYVKSIVTFDFGPSIKQPSQS
VNDLLSRGFPVSFELGMTALIVAVISGIALGIFAALRQNGIIDYIAMTIAVLGISVPNFIMATLLIQQFAVNWNIFPPST
WTSPLHMVLPTAALAMGPLAIIARLTRSSMIEVLTQDYIRTARAKGLSPFKIVMKHALKNALMPVVTILGTLTAAILTGS
FVIEKIFAIPGMGKYFVESINSRDYPVIMGTTVFYSIILIIMLFLVDMAYGILDPRIKLHKKG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=300, Percent_Identity=42.3333333333333, Blast_Score=254, Evalue=7e-69,
Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=36.0119047619048, Blast_Score=223, Evalue=2e-59,
Organism=Escherichia coli, GI1787053, Length=304, Percent_Identity=38.1578947368421, Blast_Score=210, Evalue=9e-56,
Organism=Escherichia coli, GI1789888, Length=306, Percent_Identity=33.0065359477124, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787761, Length=329, Percent_Identity=33.7386018237082, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1788504, Length=360, Percent_Identity=26.9444444444444, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787550, Length=260, Percent_Identity=30.3846153846154, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33649; Mature: 33649

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure
MKRLLWMLATILVITTLTFVMMKVIPGSPFNEERNTNEAVQRNLEAYYQLDEPLFVQYLY
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
YVKSIVTFDFGPSIKQPSQSVNDLLSRGFPVSFELGMTALIVAVISGIALGIFAALRQNG
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IIDYIAMTIAVLGISVPNFIMATLLIQQFAVNWNIFPPSTWTSPLHMVLPTAALAMGPLA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IIARLTRSSMIEVLTQDYIRTARAKGLSPFKIVMKHALKNALMPVVTILGTLTAAILTGS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIEKIFAIPGMGKYFVESINSRDYPVIMGTTVFYSIILIIMLFLVDMAYGILDPRIKLH
HHHHHHHHCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC
KKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]