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The map label for this gene is xtmA [H]

Identifier: 52785095

GI number: 52785095

Start: 1322781

End: 1323581

Strand: Direct

Name: xtmA [H]

Synonym: BLi01327

Alternate gene names: 52785095

Gene position: 1322781-1323581 (Clockwise)

Preceding gene: 52785094

Following gene: 52785096

Centisome position: 31.33

GC content: 47.82

Gene sequence:

>801_bases
ATGCCAAGGAAAAGGGATCCAAAAAGGGATGAAGCTTTTCGTCTCTATCAAAAATACGGGGGAAACATTACGAATCTCGC
AATCGCAAGAGAACTCGGCGTTTCAAATAAAAAAATCAGCGTTTGGAAAACCCGCGACCGCTGGCAAGAGGCTTTAGCCG
GAGATGACGCGAACCGTGGAAAAGCAGACATTCACAATGAAGGGCTGAATGAACGGCAGCGGCTGTTTTGCATCTATTAT
GTGAAAAGCTTCAATGCCACCCAAGCGGCGGTAAAAGCGGGCTATTCCCCGGCCAGCGCCCATGTGACAGGCTGCCGGCT
TTTGAAAAATGAAAAGGTGGCCGATGAAATCAGGCGAATCAAAAAAGAAATGGTAGGGGAGATATTCGTCGAGGCGATGG
ATGTTCTCCAAGTCTATGTAAAAATCGCGTTTGCCGATATGACCGATTATGTGACTTTCGGCAAAAAAGAGGTACAGGCT
GTCGGAAAGTCCGGACCGCTGTTTGATGAAGAAAACAATCCGGTTATGAAAGAGGTCAGCTTTGTGGATGTGAAACATTC
CGACCTCGTCGATGGCACAGTCATCACGGAAGCGAAACTCGGGAAAGAAGGGATCGCGATCAAGCTGGCCGATAAAATGA
AGGCGCTCGATAAGCTCTCACAGTATTTTGACCTTTTCCCTGATTCATTTAAGCGGAAAATTGAAAATGAGAAGCTGAAG
CTCGCCAGACAAAAAGCCGACAAAGATGCGGAAACGGGTCCCGTTGAAGTGGTCATCGCCCGAAAAGGTGATCAGGCTTG
A

Upstream 100 bases:

>100_bases
AAAAGAGAAAAAATATAACAAAGCATACTGTTCATATGGAAGATTCATATAGCGATTAAATATTACTGTTTCCGAGAATG
AGAGGCGGTGAAAATGAACA

Downstream 100 bases:

>100_bases
TCATAAAAGAAGTCAATCCGCATTTTGAAGATTATTTGTTTAACTGGGATCAGACCTTTCAATTTCTTGTCGGCGGATAC
GGTTCGTCGAAAAGCTATCA

Product: XtmA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MPRKRDPKRDEAFRLYQKYGGNITNLAIARELGVSNKKISVWKTRDRWQEALAGDDANRGKADIHNEGLNERQRLFCIYY
VKSFNATQAAVKAGYSPASAHVTGCRLLKNEKVADEIRRIKKEMVGEIFVEAMDVLQVYVKIAFADMTDYVTFGKKEVQA
VGKSGPLFDEENNPVMKEVSFVDVKHSDLVDGTVITEAKLGKEGIAIKLADKMKALDKLSQYFDLFPDSFKRKIENEKLK
LARQKADKDAETGPVEVVIARKGDQA

Sequences:

>Translated_266_residues
MPRKRDPKRDEAFRLYQKYGGNITNLAIARELGVSNKKISVWKTRDRWQEALAGDDANRGKADIHNEGLNERQRLFCIYY
VKSFNATQAAVKAGYSPASAHVTGCRLLKNEKVADEIRRIKKEMVGEIFVEAMDVLQVYVKIAFADMTDYVTFGKKEVQA
VGKSGPLFDEENNPVMKEVSFVDVKHSDLVDGTVITEAKLGKEGIAIKLADKMKALDKLSQYFDLFPDSFKRKIENEKLK
LARQKADKDAETGPVEVVIARKGDQA
>Mature_265_residues
PRKRDPKRDEAFRLYQKYGGNITNLAIARELGVSNKKISVWKTRDRWQEALAGDDANRGKADIHNEGLNERQRLFCIYYV
KSFNATQAAVKAGYSPASAHVTGCRLLKNEKVADEIRRIKKEMVGEIFVEAMDVLQVYVKIAFADMTDYVTFGKKEVQAV
GKSGPLFDEENNPVMKEVSFVDVKHSDLVDGTVITEAKLGKEGIAIKLADKMKALDKLSQYFDLFPDSFKRKIENEKLKL
ARQKADKDAETGPVEVVIARKGDQA

Specific function: Functions as a terminase [H]

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaS and B.subtilis phage SPP1 terminase small subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925
- InterPro:   IPR005335 [H]

Pfam domain/function: PF10668 Phage_terminase; PF03592 Terminase_2 [H]

EC number: NA

Molecular weight: Translated: 29979; Mature: 29848

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKRDPKRDEAFRLYQKYGGNITNLAIARELGVSNKKISVWKTRDRWQEALAGDDANRG
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCCCC
KADIHNEGLNERQRLFCIYYVKSFNATQAAVKAGYSPASAHVTGCRLLKNEKVADEIRRI
CCHHCCCCCCCHHHEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
KKEMVGEIFVEAMDVLQVYVKIAFADMTDYVTFGKKEVQAVGKSGPLFDEENNPVMKEVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHH
FVDVKHSDLVDGTVITEAKLGKEGIAIKLADKMKALDKLSQYFDLFPDSFKRKIENEKLK
EEECCCCCCCCCEEEEHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LARQKADKDAETGPVEVVIARKGDQA
HHHHHCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
PRKRDPKRDEAFRLYQKYGGNITNLAIARELGVSNKKISVWKTRDRWQEALAGDDANRG
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCCCC
KADIHNEGLNERQRLFCIYYVKSFNATQAAVKAGYSPASAHVTGCRLLKNEKVADEIRRI
CCHHCCCCCCCHHHEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
KKEMVGEIFVEAMDVLQVYVKIAFADMTDYVTFGKKEVQAVGKSGPLFDEENNPVMKEVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHH
FVDVKHSDLVDGTVITEAKLGKEGIAIKLADKMKALDKLSQYFDLFPDSFKRKIENEKLK
EEECCCCCCCCCEEEEHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LARQKADKDAETGPVEVVIARKGDQA
HHHHHCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]