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The map label for this gene is xtmB [H]

Identifier: 52785096

GI number: 52785096

Start: 1323578

End: 1324876

Strand: Direct

Name: xtmB [H]

Synonym: BLi01328

Alternate gene names: 52785096

Gene position: 1323578-1324876 (Clockwise)

Preceding gene: 52785095

Following gene: 52785097

Centisome position: 31.34

GC content: 46.19

Gene sequence:

>1299_bases
TTGATCATAAAAGAAGTCAATCCGCATTTTGAAGATTATTTGTTTAACTGGGATCAGACCTTTCAATTTCTTGTCGGCGG
ATACGGTTCGTCGAAAAGCTATCATACCGCTTTAAAAGTCGTATTAAAACTGCTTCAGGAAAAGCGGACCGCTCTTGTCG
TAAGGGAAGTGTTTGAAACACACAGGGATTCGACGTTTTCTTTATTCGCATCCATTATCGATGAGCTGGGTGTCCAAAAG
GCGGCTCAGGCGGTTTCTTCTCCGATGCATATCAGGTTTGCAAACGGCAGCCGAATTATTTTTAAAGGAATGGACAACCC
GGCGAAATTGAAATCCGTCAACAACATCTCGCTGATTTGGATTGAAGAATGTTCAGAGGTGAAGTATGAAGGCTTCAAGG
AACTGATCGGCCGGCTGAGGCATCCTTATCACAGGCTGTATATGATGTTGACGACAAACCCCGTCAGCCAGTCAAACTGG
ACGTACAGACACTTTTTCAAGGATGAGCGGAACAAGCGGTTCATTTTGGATGATGAGGTCTTGTATAAAAAGCGGGTCGC
TGTCGTCGGTGATACGTATTACCACCATTCCACAGCTGATGACAACCTGTTTTTGCCGAAAAGCTACCTCAAACAGCTTG
ATGATATGAAAGCATATGATCCCGACCTGTACCGGATTGCCAGAAAAGGGCGGTTTGGGGTAAACGGCACCAGGGTTCTG
CCGCAATTTGAAGTGATGGAGCATGAGGAGGTCATGAGGCAGATCTCCGCCATTTCCAACCCGCTGAAGAGAACCGGAAT
GGATTTCGGATTTGAGGAATCATACAATGCCGTCGTCCGGGCGGCCGTCGATCCCGACAAAAAATATCTATATATCTATT
GGGAGTACTACAAAAATAAAATGACAGATGATAAGACGGCCGAAGAACTTCACGAATTCGCGGTTGCGAAGGAGCTGATT
AAAGCTGATCCCGCTGAGCCGAAAAGCATTCAGTTTTTCAGGCAGAATGGTTTTAACATGACAGCAGCACGCAAGTTCCA
AGGCTCGCGCCTGCAATATACGAAAAAAATCAAGCGGTTTAAAAAAATATTCTGTTCTGACCGATGTGCCAATACGATCT
ACGAATTGCAGCCGCTGACCTATGCGACGGATCAAGACGGCAATCTGAAGGAGGATCAGTTTACAATTGATCCGCACACG
CTTTCCGCGCTATGGTACGCGCTTGATGATTATGAAGTAACCGATTTGAAGGCTGAGCCGGAAGTGAGAAAACGGCCGAA
CAGGAAAAGGGGGAGATAG

Upstream 100 bases:

>100_bases
AAATTGAAAATGAGAAGCTGAAGCTCGCCAGACAAAAAGCCGACAAAGATGCGGAAACGGGTCCCGTTGAAGTGGTCATC
GCCCGAAAAGGTGATCAGGC

Downstream 100 bases:

>100_bases
CGTATGTCCACTCAGCAAACGGTAAGAGCGAAAGTCATGAAATCCCGTTTTCACGGGCCTGTAACAAAACAAATATATGA
AGATCAATTTTCGGAGATCT

Product: XtmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MIIKEVNPHFEDYLFNWDQTFQFLVGGYGSSKSYHTALKVVLKLLQEKRTALVVREVFETHRDSTFSLFASIIDELGVQK
AAQAVSSPMHIRFANGSRIIFKGMDNPAKLKSVNNISLIWIEECSEVKYEGFKELIGRLRHPYHRLYMMLTTNPVSQSNW
TYRHFFKDERNKRFILDDEVLYKKRVAVVGDTYYHHSTADDNLFLPKSYLKQLDDMKAYDPDLYRIARKGRFGVNGTRVL
PQFEVMEHEEVMRQISAISNPLKRTGMDFGFEESYNAVVRAAVDPDKKYLYIYWEYYKNKMTDDKTAEELHEFAVAKELI
KADPAEPKSIQFFRQNGFNMTAARKFQGSRLQYTKKIKRFKKIFCSDRCANTIYELQPLTYATDQDGNLKEDQFTIDPHT
LSALWYALDDYEVTDLKAEPEVRKRPNRKRGR

Sequences:

>Translated_432_residues
MIIKEVNPHFEDYLFNWDQTFQFLVGGYGSSKSYHTALKVVLKLLQEKRTALVVREVFETHRDSTFSLFASIIDELGVQK
AAQAVSSPMHIRFANGSRIIFKGMDNPAKLKSVNNISLIWIEECSEVKYEGFKELIGRLRHPYHRLYMMLTTNPVSQSNW
TYRHFFKDERNKRFILDDEVLYKKRVAVVGDTYYHHSTADDNLFLPKSYLKQLDDMKAYDPDLYRIARKGRFGVNGTRVL
PQFEVMEHEEVMRQISAISNPLKRTGMDFGFEESYNAVVRAAVDPDKKYLYIYWEYYKNKMTDDKTAEELHEFAVAKELI
KADPAEPKSIQFFRQNGFNMTAARKFQGSRLQYTKKIKRFKKIFCSDRCANTIYELQPLTYATDQDGNLKEDQFTIDPHT
LSALWYALDDYEVTDLKAEPEVRKRPNRKRGR
>Mature_432_residues
MIIKEVNPHFEDYLFNWDQTFQFLVGGYGSSKSYHTALKVVLKLLQEKRTALVVREVFETHRDSTFSLFASIIDELGVQK
AAQAVSSPMHIRFANGSRIIFKGMDNPAKLKSVNNISLIWIEECSEVKYEGFKELIGRLRHPYHRLYMMLTTNPVSQSNW
TYRHFFKDERNKRFILDDEVLYKKRVAVVGDTYYHHSTADDNLFLPKSYLKQLDDMKAYDPDLYRIARKGRFGVNGTRVL
PQFEVMEHEEVMRQISAISNPLKRTGMDFGFEESYNAVVRAAVDPDKKYLYIYWEYYKNKMTDDKTAEELHEFAVAKELI
KADPAEPKSIQFFRQNGFNMTAARKFQGSRLQYTKKIKRFKKIFCSDRCANTIYELQPLTYATDQDGNLKEDQFTIDPHT
LSALWYALDDYEVTDLKAEPEVRKRPNRKRGR

Specific function: Functions as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaT and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 50745; Mature: 50745

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKEVNPHFEDYLFNWDQTFQFLVGGYGSSKSYHTALKVVLKLLQEKRTALVVREVFET
CCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRDSTFSLFASIIDELGVQKAAQAVSSPMHIRFANGSRIIFKGMDNPAKLKSVNNISLIW
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHCCCCCEEEEE
IEECSEVKYEGFKELIGRLRHPYHRLYMMLTTNPVSQSNWTYRHFFKDERNKRFILDDEV
EECHHHCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECHHH
LYKKRVAVVGDTYYHHSTADDNLFLPKSYLKQLDDMKAYDPDLYRIARKGRFGVNGTRVL
HHHHHHHEEECCCEECCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEC
PQFEVMEHEEVMRQISAISNPLKRTGMDFGFEESYNAVVRAAVDPDKKYLYIYWEYYKNK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCC
MTDDKTAEELHEFAVAKELIKADPAEPKSIQFFRQNGFNMTAARKFQGSRLQYTKKIKRF
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEHHHHCCCCHHHHHHHHHHH
KKIFCSDRCANTIYELQPLTYATDQDGNLKEDQFTIDPHTLSALWYALDDYEVTDLKAEP
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCEEECCCCCC
EVRKRPNRKRGR
HHHHCCCCCCCC
>Mature Secondary Structure
MIIKEVNPHFEDYLFNWDQTFQFLVGGYGSSKSYHTALKVVLKLLQEKRTALVVREVFET
CCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRDSTFSLFASIIDELGVQKAAQAVSSPMHIRFANGSRIIFKGMDNPAKLKSVNNISLIW
HCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHCCCCCEEEEE
IEECSEVKYEGFKELIGRLRHPYHRLYMMLTTNPVSQSNWTYRHFFKDERNKRFILDDEV
EECHHHCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECHHH
LYKKRVAVVGDTYYHHSTADDNLFLPKSYLKQLDDMKAYDPDLYRIARKGRFGVNGTRVL
HHHHHHHEEECCCEECCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEC
PQFEVMEHEEVMRQISAISNPLKRTGMDFGFEESYNAVVRAAVDPDKKYLYIYWEYYKNK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCC
MTDDKTAEELHEFAVAKELIKADPAEPKSIQFFRQNGFNMTAARKFQGSRLQYTKKIKRF
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEHHHHCCCCHHHHHHHHHHH
KKIFCSDRCANTIYELQPLTYATDQDGNLKEDQFTIDPHTLSALWYALDDYEVTDLKAEP
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCEEECCCCCC
EVRKRPNRKRGR
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 8083174 [H]