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The map label for this gene is oppB [H]

Identifier: 52785005

GI number: 52785005

Start: 1245954

End: 1246889

Strand: Direct

Name: oppB [H]

Synonym: BLi01233

Alternate gene names: 52785005

Gene position: 1245954-1246889 (Clockwise)

Preceding gene: 52785004

Following gene: 52785006

Centisome position: 29.51

GC content: 48.72

Gene sequence:

>936_bases
TTGATTAAATATTTAGGCCGTCGTCTTGTTTATATGTTAATTTCTCTCTGGGTTATCGTAACAGCTACCTTCTTCCTGAT
GAGAGCGATACCGGGCGGACCCTTTTCAGGCGAGAGGAAACTTCCCCCTGCAATTGAAGCCAGTCTCAATTCCTACTATG
GTTTAGACCAGCCTCTTTTTAAACAATATCTCGATTATTTAGTATCGGTAGCAAAGTGGGATTTCGGGCCGTCATTTAAA
TATAAGGGACAAACTGTGAACGACTTGATCAGCTCAGGGTTCCCGATTTCTTTTACACTCGGATTGGAAGCGATTTGCCT
TGCGCTCGCTTTCGGCGTATTGTTCGGCGTGATCGCCGCGCTGAAGCGAAACAAGTGGCAGGACTACACAGCGATGATCA
TTGCGGTTGTCGGGATCTCTGTGCCGAACTTCATCATGGCCGCGCTTCTCCAATACGTGCTGGCAATGAAGCTGGGCATG
TTTCCTGTCGCGCAATGGGAGTCATGGGGACATACTGTGCTTCCTGCAATCGCTGTTGCCTCGATGCCGATGGCGTTTAT
CGCCCGTTTGACGCGCTCCAGCATGCTTGAAGTGTTGAGCAGCGACTATATCCGCACGGCGCGTGCAAAAGGTTTGAGCA
CATCAGCCGTTACGTTTAAGCATGCGATACGAAATGCCATCATGCCGGTTGTTACATATATGGGCCCAATGGCGGCGTCC
ATTTTGACAGGAACGTTTGTCGTCGAAAAAGTCTTCGGTATACCAGGACTCGGCATGCACTTTGTCACAAGCATTACGAA
CCGAGACTATACGGTGATCATGGGCGTTACCGTCTTCTTCGGGGCAATCTTGCTGCTTTGCGTCTTGATTGTCGATCTTT
TATACGGCTTAATTGATCCGCGCATTAAATTGTTTGGCGCTAAGAAAGGGGAGTAA

Upstream 100 bases:

>100_bases
AATAAAATTGCATGAAAGTATATGGGGCTTAGACTTTCCCCCCATATACTTTTATTTATGAAAAGAAGTTAATAGACTGA
ATATTCGGAGGTGTGTAAAA

Downstream 100 bases:

>100_bases
GAGGATGCAGCAAATACCAAAAGACATGTTTGAACCTGCAGCTGTTGACCATAGCGAAGCCGAAAAGATCTCAAAGAAAA
ACCTTTCTTTTTGGACAGAC

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIKYLGRRLVYMLISLWVIVTATFFLMRAIPGGPFSGERKLPPAIEASLNSYYGLDQPLFKQYLDYLVSVAKWDFGPSFK
YKGQTVNDLISSGFPISFTLGLEAICLALAFGVLFGVIAALKRNKWQDYTAMIIAVVGISVPNFIMAALLQYVLAMKLGM
FPVAQWESWGHTVLPAIAVASMPMAFIARLTRSSMLEVLSSDYIRTARAKGLSTSAVTFKHAIRNAIMPVVTYMGPMAAS
ILTGTFVVEKVFGIPGLGMHFVTSITNRDYTVIMGVTVFFGAILLLCVLIVDLLYGLIDPRIKLFGAKKGE

Sequences:

>Translated_311_residues
MIKYLGRRLVYMLISLWVIVTATFFLMRAIPGGPFSGERKLPPAIEASLNSYYGLDQPLFKQYLDYLVSVAKWDFGPSFK
YKGQTVNDLISSGFPISFTLGLEAICLALAFGVLFGVIAALKRNKWQDYTAMIIAVVGISVPNFIMAALLQYVLAMKLGM
FPVAQWESWGHTVLPAIAVASMPMAFIARLTRSSMLEVLSSDYIRTARAKGLSTSAVTFKHAIRNAIMPVVTYMGPMAAS
ILTGTFVVEKVFGIPGLGMHFVTSITNRDYTVIMGVTVFFGAILLLCVLIVDLLYGLIDPRIKLFGAKKGE
>Mature_311_residues
MIKYLGRRLVYMLISLWVIVTATFFLMRAIPGGPFSGERKLPPAIEASLNSYYGLDQPLFKQYLDYLVSVAKWDFGPSFK
YKGQTVNDLISSGFPISFTLGLEAICLALAFGVLFGVIAALKRNKWQDYTAMIIAVVGISVPNFIMAALLQYVLAMKLGM
FPVAQWESWGHTVLPAIAVASMPMAFIARLTRSSMLEVLSSDYIRTARAKGLSTSAVTFKHAIRNAIMPVVTYMGPMAAS
ILTGTFVVEKVFGIPGLGMHFVTSITNRDYTVIMGVTVFFGAILLLCVLIVDLLYGLIDPRIKLFGAKKGE

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=305, Percent_Identity=44.9180327868852, Blast_Score=281, Evalue=4e-77,
Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=39.5424836601307, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=35.9050445103858, Blast_Score=201, Evalue=6e-53,
Organism=Escherichia coli, GI1789888, Length=308, Percent_Identity=34.4155844155844, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1788504, Length=365, Percent_Identity=27.9452054794521, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1787761, Length=322, Percent_Identity=32.9192546583851, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1787550, Length=286, Percent_Identity=28.6713286713287, Blast_Score=125, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34170; Mature: 34170

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYLGRRLVYMLISLWVIVTATFFLMRAIPGGPFSGERKLPPAIEASLNSYYGLDQPLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
KQYLDYLVSVAKWDFGPSFKYKGQTVNDLISSGFPISFTLGLEAICLALAFGVLFGVIAA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
LKRNKWQDYTAMIIAVVGISVPNFIMAALLQYVLAMKLGMFPVAQWESWGHTVLPAIAVA
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHH
SMPMAFIARLTRSSMLEVLSSDYIRTARAKGLSTSAVTFKHAIRNAIMPVVTYMGPMAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTGTFVVEKVFGIPGLGMHFVTSITNRDYTVIMGVTVFFGAILLLCVLIVDLLYGLIDP
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIKLFGAKKGE
HHHCCCCCCCC
>Mature Secondary Structure
MIKYLGRRLVYMLISLWVIVTATFFLMRAIPGGPFSGERKLPPAIEASLNSYYGLDQPLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
KQYLDYLVSVAKWDFGPSFKYKGQTVNDLISSGFPISFTLGLEAICLALAFGVLFGVIAA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
LKRNKWQDYTAMIIAVVGISVPNFIMAALLQYVLAMKLGMFPVAQWESWGHTVLPAIAVA
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHH
SMPMAFIARLTRSSMLEVLSSDYIRTARAKGLSTSAVTFKHAIRNAIMPVVTYMGPMAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTGTFVVEKVFGIPGLGMHFVTSITNRDYTVIMGVTVFFGAILLLCVLIVDLLYGLIDP
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIKLFGAKKGE
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]