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The map label for this gene is allD [H]

Identifier: 52784901

GI number: 52784901

Start: 1132344

End: 1133372

Strand: Direct

Name: allD [H]

Synonym: BLi01129

Alternate gene names: 52784901

Gene position: 1132344-1133372 (Clockwise)

Preceding gene: 52784900

Following gene: 52784902

Centisome position: 26.82

GC content: 40.62

Gene sequence:

>1029_bases
ATGAGTGAACCATTAGTGTATGTAGAACGTAATCGTCTCCGGCAGCTAATGAAAGATAAATTAGTGAAAGCAGGTTTACC
TGAAGAACAAGCGGATAAAACAGCTGATTTACTCATTTTTGCAGATGAACGAGGTGTTCACTCACATGGTGCAGTAAGAA
TGCAATACTATTCCGAACGTGCATTAAAAGGTGGATATAACCTGAAACCAAACTTAAGCTTCGAAAAAACGGGCCCTGCA
TCGGGGATTTATCACGGAGATAATGCATTAGGGCATTATGTGAGTTATCAAGCAATGAAAAAGGCAATCGAATTAGCAAA
AACATCAGGGATCGGTGTTGTCGGTGTTAAAGAAATGGGACACAGCGGTGCTATTGGTTATTATGCACATCAAGCAGCAT
TAGAAGGTATGGCGGCATTAACAGTATGTCAATCTGATCCCATGGTCGTGCCATTTGGCGGCACCGAACCATACTTTGGC
ACCAACTCAATTGCTTTTAGTGCGCCTAGAAAAGACGGTAGTCCAATCCTTTTTGATATGGCAACAACGGTACAAGCCTG
GGGGAAAATCTTAGATGCAAGAAGTAAAAACAAATCTATCCCAGACTCATGGGCAGTGGATAAAAATGGAGCGCCAACAA
CAGACCCGTTTAAGGTAAATGCATTATTACCAATGGCTGGGCCTAAAGGATACGGGTTAGCGATGATGGTTGATATTTTA
TCGGGGAGTTTGCTCGGCTTGCCATTTGGCAAGCATGTCACTTCTATGTATAAAGATTTATCGGAGTACCGTCGATTAGG
GCAGCTTCATCTCGTAATCAATCCTGAATACTTTGGTGGGAAGGAGCAATTCCTCGAAAAAATATCTCAAATGGTTGAAG
AATTACATGACAACCCACCTGCTGAAGGATTTAACAAAGTGTATTATCCCGGTGAAATTCAAATAGATGTGATGAAACAG
TATAAAAAAACAGGTATCCCAGTTACAAAGGAAATTTTAGATTATTTAGAGTCAGACAAAATTTACTAA

Upstream 100 bases:

>100_bases
GCCGCAAGCAACCTATGCAATTGGTTTGGATGAACCATTCTCGTATATTTATTCTAAGGATGCGAATAGAGATATTAATC
TATAAAGAGGGGCAATTTTA

Downstream 100 bases:

>100_bases
TCATGTAATGAAGGGGGAAGCAGATGCGCGTATCTAAGCAGGAGCTGTTTCATTTAATCAAACAGAAGCTGATCAAAGCT
GGATTAAACGAAGGAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSEPLVYVERNRLRQLMKDKLVKAGLPEEQADKTADLLIFADERGVHSHGAVRMQYYSERALKGGYNLKPNLSFEKTGPA
SGIYHGDNALGHYVSYQAMKKAIELAKTSGIGVVGVKEMGHSGAIGYYAHQAALEGMAALTVCQSDPMVVPFGGTEPYFG
TNSIAFSAPRKDGSPILFDMATTVQAWGKILDARSKNKSIPDSWAVDKNGAPTTDPFKVNALLPMAGPKGYGLAMMVDIL
SGSLLGLPFGKHVTSMYKDLSEYRRLGQLHLVINPEYFGGKEQFLEKISQMVEELHDNPPAEGFNKVYYPGEIQIDVMKQ
YKKTGIPVTKEILDYLESDKIY

Sequences:

>Translated_342_residues
MSEPLVYVERNRLRQLMKDKLVKAGLPEEQADKTADLLIFADERGVHSHGAVRMQYYSERALKGGYNLKPNLSFEKTGPA
SGIYHGDNALGHYVSYQAMKKAIELAKTSGIGVVGVKEMGHSGAIGYYAHQAALEGMAALTVCQSDPMVVPFGGTEPYFG
TNSIAFSAPRKDGSPILFDMATTVQAWGKILDARSKNKSIPDSWAVDKNGAPTTDPFKVNALLPMAGPKGYGLAMMVDIL
SGSLLGLPFGKHVTSMYKDLSEYRRLGQLHLVINPEYFGGKEQFLEKISQMVEELHDNPPAEGFNKVYYPGEIQIDVMKQ
YKKTGIPVTKEILDYLESDKIY
>Mature_341_residues
SEPLVYVERNRLRQLMKDKLVKAGLPEEQADKTADLLIFADERGVHSHGAVRMQYYSERALKGGYNLKPNLSFEKTGPAS
GIYHGDNALGHYVSYQAMKKAIELAKTSGIGVVGVKEMGHSGAIGYYAHQAALEGMAALTVCQSDPMVVPFGGTEPYFGT
NSIAFSAPRKDGSPILFDMATTVQAWGKILDARSKNKSIPDSWAVDKNGAPTTDPFKVNALLPMAGPKGYGLAMMVDILS
GSLLGLPFGKHVTSMYKDLSEYRRLGQLHLVINPEYFGGKEQFLEKISQMVEELHDNPPAEGFNKVYYPGEIQIDVMKQY
KKTGIPVTKEILDYLESDKIY

Specific function: Involved in the anaerobic utilization of allantoin [H]

COG id: COG2055

COG function: function code C; Malate/L-lactate dehydrogenases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LDH2/MDH2 oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1786727, Length=335, Percent_Identity=56.1194029850746, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1787020, Length=324, Percent_Identity=31.7901234567901, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1790000, Length=333, Percent_Identity=23.1231231231231, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17507179, Length=344, Percent_Identity=30.5232558139535, Blast_Score=154, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI17536633, Length=320, Percent_Identity=32.5, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24667904, Length=309, Percent_Identity=32.3624595469256, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24667908, Length=309, Percent_Identity=32.3624595469256, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI45553211, Length=309, Percent_Identity=32.3624595469256, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24667912, Length=309, Percent_Identity=32.3624595469256, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24658010, Length=304, Percent_Identity=27.3026315789474, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24648360, Length=324, Percent_Identity=27.4691358024691, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003767
- InterPro:   IPR017590 [H]

Pfam domain/function: PF02615 Ldh_2 [H]

EC number: =1.1.1.154 [H]

Molecular weight: Translated: 37639; Mature: 37507

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPLVYVERNRLRQLMKDKLVKAGLPEEQADKTADLLIFADERGVHSHGAVRMQYYSER
CCCCEEEECHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEECCCCCCCCCCEEEHHHHHH
ALKGGYNLKPNLSFEKTGPASGIYHGDNALGHYVSYQAMKKAIELAKTSGIGVVGVKEMG
HHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCC
HSGAIGYYAHQAALEGMAALTVCQSDPMVVPFGGTEPYFGTNSIAFSAPRKDGSPILFDM
CCCCHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCEEEECCCCCCCEEEEHH
ATTVQAWGKILDARSKNKSIPDSWAVDKNGAPTTDPFKVNALLPMAGPKGYGLAMMVDIL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
SGSLLGLPFGKHVTSMYKDLSEYRRLGQLHLVINPEYFGGKEQFLEKISQMVEELHDNPP
CCCEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
AEGFNKVYYPGEIQIDVMKQYKKTGIPVTKEILDYLESDKIY
CCCCCCEECCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SEPLVYVERNRLRQLMKDKLVKAGLPEEQADKTADLLIFADERGVHSHGAVRMQYYSER
CCCEEEECHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEECCCCCCCCCCEEEHHHHHH
ALKGGYNLKPNLSFEKTGPASGIYHGDNALGHYVSYQAMKKAIELAKTSGIGVVGVKEMG
HHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCC
HSGAIGYYAHQAALEGMAALTVCQSDPMVVPFGGTEPYFGTNSIAFSAPRKDGSPILFDM
CCCCHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCEEEECCCCCCCEEEEHH
ATTVQAWGKILDARSKNKSIPDSWAVDKNGAPTTDPFKVNALLPMAGPKGYGLAMMVDIL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
SGSLLGLPFGKHVTSMYKDLSEYRRLGQLHLVINPEYFGGKEQFLEKISQMVEELHDNPP
CCCEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
AEGFNKVYYPGEIQIDVMKQYKKTGIPVTKEILDYLESDKIY
CCCCCCEECCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]