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The map label for this gene is allC [H]

Identifier: 52784899

GI number: 52784899

Start: 1130314

End: 1131516

Strand: Direct

Name: allC [H]

Synonym: BLi01127

Alternate gene names: 52784899

Gene position: 1130314-1131516 (Clockwise)

Preceding gene: 52784898

Following gene: 52784900

Centisome position: 26.77

GC content: 38.24

Gene sequence:

>1203_bases
TTGGATAAGAAATTCACAAGTTTTGGCGGTTTAGAACAAGGGGGTATTACGCGTCTGTTATACTCTCCTGAATGGATTGC
TGCAGTTCGCGAACTGGAAGCGACATTCAAGGAAGAAGGTTTAGAAGTAAGCTTTGATGATGTTGGAAACTTATCTGGTC
GCCTTGTTGGAAGTAAGCATCCTGAAGAAACTATTTTAACAGGATCACATATCGATACAGTTGTAGAAGGCGGTCATCTG
GATGGACAATTCGGTATCTTATCTGCATTGGTTGCTGTGAAATATTTAAAAGAAAAACATGGTCAACCATTACGAACAAT
AGAAGTACTATCTCTCGCAGAAGAAGAAGGAAGCCGATTCCCATATACATTTTGGGGAAGTAAAAACTTCTTTAACTTAG
CCAAAAAATCGGATGTTGAAACAATAGAAGATGCTGATGGAATTAAATTTGAAGATGCAATGCACGAATCGGGTTTTGAT
TACCGTAAAACAGATCATGTTCGTGACGATATTAAAGCATTTGTTGAAGTACATATCGAACAAGGGAAAGTATTAGAGGC
GGAAAATAAAGCGATAGGTGTTGTAACTGGGATTGTTGGCCAAAAACGTTACACAATTAACTTGAAAGGTGAAGCAAATC
ACGCTGGCACGACACCGATGTCATTACGAAGGGATACAGTTGTTGCATATAGTGAAATTGTAACAGACTTAACGAAACGA
GCTAGAGAAATTGGGGAGCCTCTTGTATTAACGTTTGGACATGTCACTCCTGTTCCAAACACGGTAAATGTCGTCCCTGG
AGAAATTACTTTTTCGATAGACTGTCGTCATATTGATCAACAACTATTAAATAATTTTGCGAAAGAAATTGAAGATAAAG
TTAAAGCGGTTGCAGAAGCAAACAACATGACTTATGACATTAATTTATGGATGGATGAAGCACCGTCATTGATGGATAAA
GAAATCATTAAAATAATTGAACAAGCAGCTAAGGCCAATGTGGGGGACAGCTATAAATTGATGCCATCTGGTGCAGGTCA
TGATGCGCAAATTTTTGCGGATTTTGTCCCAACAGCAATGCTGTTTGTACCTTCTATTGGCGGAATTAGCCACAATACCA
ATGAAGAAACGAAGATAGAAGACCTTGTGAAGGGGATTGAAGTATTGAAAGATGTATTGTTTGAACTAGCTTATAAGGAA
TAA

Upstream 100 bases:

>100_bases
TGTTGGTTATGTCAATGAATGGTCGTAAACAGGGTTCTATGATGAAAGTAAATAGAGAAAGGAGGAGAAAAAAATAGATA
TTCGATCAACCTTTGAAACG

Downstream 100 bases:

>100_bases
TAATGAAAAGGAGCCAGATACTCATGAGTTACTTAAATCATAATCAAGGATACAGAGAAGGTTTATTAGAAACACGTTCA
GTAATAAAAAAGGATAATTA

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: Allantoate deiminase [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MDKKFTSFGGLEQGGITRLLYSPEWIAAVRELEATFKEEGLEVSFDDVGNLSGRLVGSKHPEETILTGSHIDTVVEGGHL
DGQFGILSALVAVKYLKEKHGQPLRTIEVLSLAEEEGSRFPYTFWGSKNFFNLAKKSDVETIEDADGIKFEDAMHESGFD
YRKTDHVRDDIKAFVEVHIEQGKVLEAENKAIGVVTGIVGQKRYTINLKGEANHAGTTPMSLRRDTVVAYSEIVTDLTKR
AREIGEPLVLTFGHVTPVPNTVNVVPGEITFSIDCRHIDQQLLNNFAKEIEDKVKAVAEANNMTYDINLWMDEAPSLMDK
EIIKIIEQAAKANVGDSYKLMPSGAGHDAQIFADFVPTAMLFVPSIGGISHNTNEETKIEDLVKGIEVLKDVLFELAYKE

Sequences:

>Translated_400_residues
MDKKFTSFGGLEQGGITRLLYSPEWIAAVRELEATFKEEGLEVSFDDVGNLSGRLVGSKHPEETILTGSHIDTVVEGGHL
DGQFGILSALVAVKYLKEKHGQPLRTIEVLSLAEEEGSRFPYTFWGSKNFFNLAKKSDVETIEDADGIKFEDAMHESGFD
YRKTDHVRDDIKAFVEVHIEQGKVLEAENKAIGVVTGIVGQKRYTINLKGEANHAGTTPMSLRRDTVVAYSEIVTDLTKR
AREIGEPLVLTFGHVTPVPNTVNVVPGEITFSIDCRHIDQQLLNNFAKEIEDKVKAVAEANNMTYDINLWMDEAPSLMDK
EIIKIIEQAAKANVGDSYKLMPSGAGHDAQIFADFVPTAMLFVPSIGGISHNTNEETKIEDLVKGIEVLKDVLFELAYKE
>Mature_400_residues
MDKKFTSFGGLEQGGITRLLYSPEWIAAVRELEATFKEEGLEVSFDDVGNLSGRLVGSKHPEETILTGSHIDTVVEGGHL
DGQFGILSALVAVKYLKEKHGQPLRTIEVLSLAEEEGSRFPYTFWGSKNFFNLAKKSDVETIEDADGIKFEDAMHESGFD
YRKTDHVRDDIKAFVEVHIEQGKVLEAENKAIGVVTGIVGQKRYTINLKGEANHAGTTPMSLRRDTVVAYSEIVTDLTKR
AREIGEPLVLTFGHVTPVPNTVNVVPGEITFSIDCRHIDQQLLNNFAKEIEDKVKAVAEANNMTYDINLWMDEAPSLMDK
EIIKIIEQAAKANVGDSYKLMPSGAGHDAQIFADFVPTAMLFVPSIGGISHNTNEETKIEDLVKGIEVLKDVLFELAYKE

Specific function: Involved in the anaerobic utilization of allantoin. Converts allantoate to (S)-ureidoglycolate and ammonia [H]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=397, Percent_Identity=53.904282115869, Blast_Score=456, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017591
- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.3.-

Molecular weight: Translated: 44273; Mature: 44273

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKFTSFGGLEQGGITRLLYSPEWIAAVRELEATFKEEGLEVSFDDVGNLSGRLVGSKH
CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCEECCCCC
PEETILTGSHIDTVVEGGHLDGQFGILSALVAVKYLKEKHGQPLRTIEVLSLAEEEGSRF
CCHHEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
PYTFWGSKNFFNLAKKSDVETIEDADGIKFEDAMHESGFDYRKTDHVRDDIKAFVEVHIE
CEEECCCCCHHHHHHHCCCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
QGKVLEAENKAIGVVTGIVGQKRYTINLKGEANHAGTTPMSLRRDTVVAYSEIVTDLTKR
CCCEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AREIGEPLVLTFGHVTPVPNTVNVVPGEITFSIDCRHIDQQLLNNFAKEIEDKVKAVAEA
HHHHCCCEEEEECCCCCCCCCCEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
NNMTYDINLWMDEAPSLMDKEIIKIIEQAAKANVGDSYKLMPSGAGHDAQIFADFVPTAM
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHH
LFVPSIGGISHNTNEETKIEDLVKGIEVLKDVLFELAYKE
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKKFTSFGGLEQGGITRLLYSPEWIAAVRELEATFKEEGLEVSFDDVGNLSGRLVGSKH
CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCEECCCCC
PEETILTGSHIDTVVEGGHLDGQFGILSALVAVKYLKEKHGQPLRTIEVLSLAEEEGSRF
CCHHEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
PYTFWGSKNFFNLAKKSDVETIEDADGIKFEDAMHESGFDYRKTDHVRDDIKAFVEVHIE
CEEECCCCCHHHHHHHCCCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
QGKVLEAENKAIGVVTGIVGQKRYTINLKGEANHAGTTPMSLRRDTVVAYSEIVTDLTKR
CCCEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AREIGEPLVLTFGHVTPVPNTVNVVPGEITFSIDCRHIDQQLLNNFAKEIEDKVKAVAEA
HHHHCCCEEEEECCCCCCCCCCEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
NNMTYDINLWMDEAPSLMDKEIIKIIEQAAKANVGDSYKLMPSGAGHDAQIFADFVPTAM
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHH
LFVPSIGGISHNTNEETKIEDLVKGIEVLKDVLFELAYKE
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]