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The map label for this gene is yrkC [H]

Identifier: 52784793

GI number: 52784793

Start: 1024084

End: 1024626

Strand: Reverse

Name: yrkC [H]

Synonym: BLi01021

Alternate gene names: 52784793

Gene position: 1024626-1024084 (Counterclockwise)

Preceding gene: 52784796

Following gene: 52784792

Centisome position: 24.27

GC content: 49.72

Gene sequence:

>543_bases
ATGCATCCATATCAATTTCCTTATCACCTTCCTTCGCCTTACAGCGCCGGACGGTTTCACGGATCAGGGTATGCAGGCGC
TTTTCGAACACCCGGCACCGAAGAACGTATCGTGTTAAGAGATTATGGACAAAAACCGTTTGCCTCTAACATCAATGAAG
CGGCAAAGCAGAACAAAACGTTTCGCACCGCTTTATGGACAGGAAGGCATTTGCAAGTTACCCTGATGAGCCTCAACCCA
GGCGAAGACATCGGATTGGAAATGCATCCTCACGTCGATCAGTTCCTTCGTGTTGAACTAGGCAGGGGAATTGTTCAGAT
GGGGCCGAGCAAACATCATTTGCCATTTAGAAGAAATGTATATGATGACACCGCTATCGTCGTCCCTGCCGGAACATGGC
ACAATCTCACCAATACAGGCAATACTCCGCTTAAACTTTATTCGATCTATGCTCCGCCCAACCATCCATTCGGCACCGTC
CATCGAACGAAAGCCGATGCGCTGGCCGCGGAAGGACACCGCGCTCATGACCGTTACTTTTGA

Upstream 100 bases:

>100_bases
ATCTGATACCATGAAGCCTATAAAATTGAGACTAGGCACGCTCCATACGCCTATTGCATACGTTGATGTTAATAAAGCTA
ATGAGGAGACCTAAAAACAT

Downstream 100 bases:

>100_bases
CAGACGATCAAAACAGCTTACCCGCACCTCTTAAATGAAGGATATCCTCAAAAAAATAAGCCTTTTAGCATAAAATAAAG
ATTCATATGCTAAAGGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MHPYQFPYHLPSPYSAGRFHGSGYAGAFRTPGTEERIVLRDYGQKPFASNINEAAKQNKTFRTALWTGRHLQVTLMSLNP
GEDIGLEMHPHVDQFLRVELGRGIVQMGPSKHHLPFRRNVYDDTAIVVPAGTWHNLTNTGNTPLKLYSIYAPPNHPFGTV
HRTKADALAAEGHRAHDRYF

Sequences:

>Translated_180_residues
MHPYQFPYHLPSPYSAGRFHGSGYAGAFRTPGTEERIVLRDYGQKPFASNINEAAKQNKTFRTALWTGRHLQVTLMSLNP
GEDIGLEMHPHVDQFLRVELGRGIVQMGPSKHHLPFRRNVYDDTAIVVPAGTWHNLTNTGNTPLKLYSIYAPPNHPFGTV
HRTKADALAAEGHRAHDRYF
>Mature_180_residues
MHPYQFPYHLPSPYSAGRFHGSGYAGAFRTPGTEERIVLRDYGQKPFASNINEAAKQNKTFRTALWTGRHLQVTLMSLNP
GEDIGLEMHPHVDQFLRVELGRGIVQMGPSKHHLPFRRNVYDDTAIVVPAGTWHNLTNTGNTPLKLYSIYAPPNHPFGTV
HRTKADALAAEGHRAHDRYF

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 20311; Mature: 20311

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPYQFPYHLPSPYSAGRFHGSGYAGAFRTPGTEERIVLRDYGQKPFASNINEAAKQNKT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCE
FRTALWTGRHLQVTLMSLNPGEDIGLEMHPHVDQFLRVELGRGIVQMGPSKHHLPFRRNV
EEEEEECCCEEEEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCC
YDDTAIVVPAGTWHNLTNTGNTPLKLYSIYAPPNHPFGTVHRTKADALAAEGHRAHDRYF
CCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHPYQFPYHLPSPYSAGRFHGSGYAGAFRTPGTEERIVLRDYGQKPFASNINEAAKQNKT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCE
FRTALWTGRHLQVTLMSLNPGEDIGLEMHPHVDQFLRVELGRGIVQMGPSKHHLPFRRNV
EEEEEECCCEEEEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCC
YDDTAIVVPAGTWHNLTNTGNTPLKLYSIYAPPNHPFGTVHRTKADALAAEGHRAHDRYF
CCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]