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The map label for this gene is yfmR [H]

Identifier: 52784559

GI number: 52784559

Start: 770187

End: 772076

Strand: Direct

Name: yfmR [H]

Synonym: BLi00760

Alternate gene names: 52784559

Gene position: 770187-772076 (Clockwise)

Preceding gene: 52784558

Following gene: 52784560

Centisome position: 18.24

GC content: 52.54

Gene sequence:

>1890_bases
ATGAGCATTTTTAAAGCGGAAGGTTTATATAAAACTTACGGAGACAAAACATTATTTGACCATATATCGTTCCATATTGA
AGAAAACGAACGGATCGGCTTGATCGGACCGAACGGAACGGGAAAAAGCAGCTTGCTGAAAGTGATCGCCGGCCATGAAT
CGACCGAAAAAGGAGACATCACAAAGCCCGGCAGCCTCCATATCGAGTACTTGGATCAGGATCCTGATTTGGACGGTCCG
GAAACCGTGCTTGAGCACATTTATTCGGGAGATTCCGTGATGATGCGGACGATGAGGACGTATGAGCAGGCGCTTCAGGA
GCTGAATGCGGCGCCTGATGATCCGAAGAAGCAGGAAAACCTGCTGGCGGCGCAGGGGAAAATGGACGAACATGGCGCCT
GGGACGCGAATACGGCGGCAAAAACGATATTGACGAAGCTTGGCGTCGCGGATGTGGCAAAAGAAGTGAGCTCCCTTTCC
GGGGGGCAAAAAAAGCGTGTTGCGATTGCGAAAACATTAATTCAGCCCGCTGACCTCCTCATTTTGGATGAGCCGACAAA
CCACCTTGACAATGAAACGATCGAATGGCTTGAAGGCTATTTGAGCGGGTATCCGGGCTCCGTCGTCCTCGTCACCCATG
ACCGCTATTTTTTAAACCGGGTGACCAACAGGATCTATGAACTGGATCGAGGGCGCCTATACACATACAAAGGGAACTAC
GAAGTGTTTTTGGAAAAGCGGGCCGAAAGAGAAGCGCTCGCCGAACAAAACGAAACGAAGCGGCAAAACCTTCTCAGAAG
GGAGCTTGCTTGGCTGAGAAGGGGGGCCAAAGCCCGTTCGACAAAGCAAAAAGCAAGAATTCAGCGGGTGGAGGAACTAA
AGGAGCAGGACGCGCCTGAAACCGGTTCTTCCCTTGATTTCGCGATCGGCTCCCACCGTCTCGGCAAGCAGGTGATTGAA
GCGGAAGGCGTTGACATCAGCCGCGGCGGGAATCAGCTTGTCCGTTCATTCAATGAACTGATTGTGCCGGGGGACCGGAT
CGGCATCATCGGACCGAACGGGATCGGCAAAACAACACTCTTAAACGCGCTTGCCGGGCGCATTAAGCCTGACGGAGGAC
AGATCACGATCGGCCAGACCGTAAGAATCGGCTATTATACACAGGATCACAGCGAAATGAACGATGCGCTGCAGGTCGTC
GAATACATCAAGGAGACGGCTGAGGTCGTCAAAACGGCCGACGGACAAGTGGTCACAGCGGAGCAGATGCTGGAAAGGTT
CCTCTTTCCGCGGAGCGTGCAGCGCAACTTGATCCGCAAGCTGTCAGGCGGGGAAAAGAGGCGCCTTTATCTCTTGAAAG
TGCTGATGGAGGAGCCGAACGTCCTGTTCCTCGATGAGCCGACAAACGACCTTGATACCGAGACGCTCGGCGTGCTCGAA
GATTATTTGGAGCAGTTTCCCGGCGTTGTCGTGACCGTATCCCATGACCGCTATTTCCTTGACCGCGTAGTCGACAGGCT
GCTTGTATTTGAAGGCGGCGGAAACGTATCGCGTTTTCAAGGTTCCTACAGCGAATATATGGAGAAGCAAAAGGAGAACA
GCCGTCAAAAGCCGGCGTCTGAAGCCGCAGAACCTGTCAAACCTGAGAAAAAGAAAAGGAAGAAACTGTCTTATAAAGAT
CAGCTGGAATGGGACGGCATCGAAGACAGAATCGCCGCTCTGGAAGAAAAGCATAAACGGCTTGAAGAGGAAATCGCCGC
CGCCGGCAGCGATTTTGCCAAAATCCAGACATTGATGGAAGAGCAGGCGCAAACAGCCGAAGAGCTCGAAGCGGCAATGG
AGCGCTGGACAGAGCTGTCGCTGTTGATCGAAGAGCTTGAACAATCGTAA

Upstream 100 bases:

>100_bases
GGCCGTCTTTCAATAATGTCCGCGAAAAAGCTCTCACTAGTTTTCTTGCATCATCTGCATTAAAATAAAGTTATGACATT
ACGTTAGGATTGGTAGACAG

Downstream 100 bases:

>100_bases
GTGAGACTGCCGGGAAATCCCGGCGGTTTTGATATGGAAAAAGGAGTTTGAACAAATATGCCTTTTGAAGAATTGCTCAG
CTGTCTGCTGATGGCCGCAT

Product: YfmR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 628

Protein sequence:

>629_residues
MSIFKAEGLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSSLLKVIAGHESTEKGDITKPGSLHIEYLDQDPDLDGP
ETVLEHIYSGDSVMMRTMRTYEQALQELNAAPDDPKKQENLLAAQGKMDEHGAWDANTAAKTILTKLGVADVAKEVSSLS
GGQKKRVAIAKTLIQPADLLILDEPTNHLDNETIEWLEGYLSGYPGSVVLVTHDRYFLNRVTNRIYELDRGRLYTYKGNY
EVFLEKRAEREALAEQNETKRQNLLRRELAWLRRGAKARSTKQKARIQRVEELKEQDAPETGSSLDFAIGSHRLGKQVIE
AEGVDISRGGNQLVRSFNELIVPGDRIGIIGPNGIGKTTLLNALAGRIKPDGGQITIGQTVRIGYYTQDHSEMNDALQVV
EYIKETAEVVKTADGQVVTAEQMLERFLFPRSVQRNLIRKLSGGEKRRLYLLKVLMEEPNVLFLDEPTNDLDTETLGVLE
DYLEQFPGVVVTVSHDRYFLDRVVDRLLVFEGGGNVSRFQGSYSEYMEKQKENSRQKPASEAAEPVKPEKKKRKKLSYKD
QLEWDGIEDRIAALEEKHKRLEEEIAAAGSDFAKIQTLMEEQAQTAEELEAAMERWTELSLLIEELEQS

Sequences:

>Translated_629_residues
MSIFKAEGLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSSLLKVIAGHESTEKGDITKPGSLHIEYLDQDPDLDGP
ETVLEHIYSGDSVMMRTMRTYEQALQELNAAPDDPKKQENLLAAQGKMDEHGAWDANTAAKTILTKLGVADVAKEVSSLS
GGQKKRVAIAKTLIQPADLLILDEPTNHLDNETIEWLEGYLSGYPGSVVLVTHDRYFLNRVTNRIYELDRGRLYTYKGNY
EVFLEKRAEREALAEQNETKRQNLLRRELAWLRRGAKARSTKQKARIQRVEELKEQDAPETGSSLDFAIGSHRLGKQVIE
AEGVDISRGGNQLVRSFNELIVPGDRIGIIGPNGIGKTTLLNALAGRIKPDGGQITIGQTVRIGYYTQDHSEMNDALQVV
EYIKETAEVVKTADGQVVTAEQMLERFLFPRSVQRNLIRKLSGGEKRRLYLLKVLMEEPNVLFLDEPTNDLDTETLGVLE
DYLEQFPGVVVTVSHDRYFLDRVVDRLLVFEGGGNVSRFQGSYSEYMEKQKENSRQKPASEAAEPVKPEKKKRKKLSYKD
QLEWDGIEDRIAALEEKHKRLEEEIAAAGSDFAKIQTLMEEQAQTAEELEAAMERWTELSLLIEELEQS
>Mature_628_residues
SIFKAEGLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSSLLKVIAGHESTEKGDITKPGSLHIEYLDQDPDLDGPE
TVLEHIYSGDSVMMRTMRTYEQALQELNAAPDDPKKQENLLAAQGKMDEHGAWDANTAAKTILTKLGVADVAKEVSSLSG
GQKKRVAIAKTLIQPADLLILDEPTNHLDNETIEWLEGYLSGYPGSVVLVTHDRYFLNRVTNRIYELDRGRLYTYKGNYE
VFLEKRAEREALAEQNETKRQNLLRRELAWLRRGAKARSTKQKARIQRVEELKEQDAPETGSSLDFAIGSHRLGKQVIEA
EGVDISRGGNQLVRSFNELIVPGDRIGIIGPNGIGKTTLLNALAGRIKPDGGQITIGQTVRIGYYTQDHSEMNDALQVVE
YIKETAEVVKTADGQVVTAEQMLERFLFPRSVQRNLIRKLSGGEKRRLYLLKVLMEEPNVLFLDEPTNDLDTETLGVLED
YLEQFPGVVVTVSHDRYFLDRVVDRLLVFEGGGNVSRFQGSYSEYMEKQKENSRQKPASEAAEPVKPEKKKRKKLSYKDQ
LEWDGIEDRIAALEEKHKRLEEEIAAAGSDFAKIQTLMEEQAQTAEELEAAMERWTELSLLIEELEQS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=545, Percent_Identity=30.4587155963303, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI10947137, Length=541, Percent_Identity=29.9445471349353, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI27881506, Length=541, Percent_Identity=29.9445471349353, Blast_Score=176, Evalue=7e-44,
Organism=Homo sapiens, GI10947135, Length=529, Percent_Identity=29.8676748582231, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI69354671, Length=529, Percent_Identity=29.8676748582231, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI27262624, Length=145, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI27262626, Length=145, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1787182, Length=635, Percent_Identity=33.8582677165354, Blast_Score=350, Evalue=2e-97,
Organism=Escherichia coli, GI2367384, Length=548, Percent_Identity=35.948905109489, Blast_Score=338, Evalue=4e-94,
Organism=Escherichia coli, GI1789751, Length=645, Percent_Identity=30.5426356589147, Blast_Score=275, Evalue=7e-75,
Organism=Escherichia coli, GI1787041, Length=522, Percent_Identity=31.6091954022989, Blast_Score=251, Evalue=1e-67,
Organism=Escherichia coli, GI1788506, Length=567, Percent_Identity=23.6331569664903, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI87081782, Length=570, Percent_Identity=23.859649122807, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789672, Length=257, Percent_Identity=26.4591439688716, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787029, Length=240, Percent_Identity=28.75, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788761, Length=275, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1788165, Length=208, Percent_Identity=26.4423076923077, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788225, Length=218, Percent_Identity=27.5229357798165, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787758, Length=179, Percent_Identity=29.0502793296089, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789864, Length=251, Percent_Identity=22.7091633466135, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786398, Length=252, Percent_Identity=25, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=534, Percent_Identity=29.2134831460674, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI17553372, Length=545, Percent_Identity=31.5596330275229, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17555318, Length=546, Percent_Identity=28.3882783882784, Blast_Score=188, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI193211015, Length=296, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=231, Percent_Identity=26.8398268398268, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=293, Percent_Identity=25.938566552901, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=296, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=524, Percent_Identity=30.9160305343511, Blast_Score=206, Evalue=8e-54,
Organism=Saccharomyces cerevisiae, GI6320874, Length=540, Percent_Identity=29.6296296296296, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6324314, Length=381, Percent_Identity=27.2965879265092, Blast_Score=129, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6323278, Length=381, Percent_Identity=27.5590551181102, Blast_Score=127, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6325030, Length=380, Percent_Identity=27.3684210526316, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6324498, Length=297, Percent_Identity=26.2626262626263, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24666836, Length=538, Percent_Identity=31.7843866171004, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24642252, Length=556, Percent_Identity=29.6762589928058, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI18859989, Length=556, Percent_Identity=29.6762589928058, Blast_Score=189, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24641342, Length=546, Percent_Identity=27.6556776556777, Blast_Score=183, Evalue=4e-46,
Organism=Drosophila melanogaster, GI116007184, Length=204, Percent_Identity=28.4313725490196, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI28574533, Length=204, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=7e-12,
Organism=Drosophila melanogaster, GI221500365, Length=204, Percent_Identity=28.4313725490196, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI281362751, Length=157, Percent_Identity=30.5732484076433, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24650853, Length=157, Percent_Identity=29.9363057324841, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24650855, Length=157, Percent_Identity=29.9363057324841, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161076682, Length=188, Percent_Identity=30.3191489361702, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161076684, Length=188, Percent_Identity=30.3191489361702, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581617, Length=188, Percent_Identity=30.3191489361702, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581615, Length=188, Percent_Identity=30.3191489361702, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70909; Mature: 70778

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFKAEGLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSSLLKVIAGHESTEKGDI
CCCCCCCCCHHHCCCHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCC
TKPGSLHIEYLDQDPDLDGPETVLEHIYSGDSVMMRTMRTYEQALQELNAAPDDPKKQEN
CCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LLAAQGKMDEHGAWDANTAAKTILTKLGVADVAKEVSSLSGGQKKRVAIAKTLIQPADLL
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEE
ILDEPTNHLDNETIEWLEGYLSGYPGSVVLVTHDRYFLNRVTNRIYELDRGRLYTYKGNY
EECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCE
EVFLEKRAEREALAEQNETKRQNLLRRELAWLRRGAKARSTKQKARIQRVEELKEQDAPE
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
TGSSLDFAIGSHRLGKQVIEAEGVDISRGGNQLVRSFNELIVPGDRIGIIGPNGIGKTTL
CCCCCCHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHH
LNALAGRIKPDGGQITIGQTVRIGYYTQDHSEMNDALQVVEYIKETAEVVKTADGQVVTA
HHHHHHCCCCCCCEEEECCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH
EQMLERFLFPRSVQRNLIRKLSGGEKRRLYLLKVLMEEPNVLFLDEPTNDLDTETLGVLE
HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DYLEQFPGVVVTVSHDRYFLDRVVDRLLVFEGGGNVSRFQGSYSEYMEKQKENSRQKPAS
HHHHHCCCEEEEECCCHHHHHHHHHHHEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCHH
EAAEPVKPEKKKRKKLSYKDQLEWDGIEDRIAALEEKHKRLEEEIAAAGSDFAKIQTLME
HHCCCCCCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EQAQTAEELEAAMERWTELSLLIEELEQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIFKAEGLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSSLLKVIAGHESTEKGDI
CCCCCCCCHHHCCCHHHHHHHEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCC
TKPGSLHIEYLDQDPDLDGPETVLEHIYSGDSVMMRTMRTYEQALQELNAAPDDPKKQEN
CCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LLAAQGKMDEHGAWDANTAAKTILTKLGVADVAKEVSSLSGGQKKRVAIAKTLIQPADLL
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEE
ILDEPTNHLDNETIEWLEGYLSGYPGSVVLVTHDRYFLNRVTNRIYELDRGRLYTYKGNY
EECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCE
EVFLEKRAEREALAEQNETKRQNLLRRELAWLRRGAKARSTKQKARIQRVEELKEQDAPE
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
TGSSLDFAIGSHRLGKQVIEAEGVDISRGGNQLVRSFNELIVPGDRIGIIGPNGIGKTTL
CCCCCCHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHH
LNALAGRIKPDGGQITIGQTVRIGYYTQDHSEMNDALQVVEYIKETAEVVKTADGQVVTA
HHHHHHCCCCCCCEEEECCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH
EQMLERFLFPRSVQRNLIRKLSGGEKRRLYLLKVLMEEPNVLFLDEPTNDLDTETLGVLE
HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DYLEQFPGVVVTVSHDRYFLDRVVDRLLVFEGGGNVSRFQGSYSEYMEKQKENSRQKPAS
HHHHHCCCEEEEECCCHHHHHHHHHHHEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCHH
EAAEPVKPEKKKRKKLSYKDQLEWDGIEDRIAALEEKHKRLEEEIAAAGSDFAKIQTLME
HHCCCCCCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EQAQTAEELEAAMERWTELSLLIEELEQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]