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The map label for this gene is yfmS [H]

Identifier: 52784557

GI number: 52784557

Start: 767681

End: 768532

Strand: Direct

Name: yfmS [H]

Synonym: BLi00758

Alternate gene names: 52784557

Gene position: 767681-768532 (Clockwise)

Preceding gene: 52784556

Following gene: 52784558

Centisome position: 18.18

GC content: 52.46

Gene sequence:

>852_bases
ATGAATGAAGCAGTAAAAACGGACATCCACCCGCTGCTGGATGCTTTTGTGAAAGTGGCGCCGTTCCTGAATCAGCTGAT
TCAGGACGATGTGACAGTGGGGATTTACGATACCGAAAAGCTGATCGTCAACATCCCGGGAAAGACATTTTCCCTGAATG
TCAAAGCGGGTGACCCTTTGCAGGAAGGCGATATTATTACAGACGCCATCCGCCAAAACAAAAAGAAAGTAAGCATGGTG
CCTAAGGAGCTGTTCGGCTTCCCTCTTGCGGCGAGAGCGATCCCGCTCCACGACGAGAACGGAAGGGTTATCGGCGGAGT
CGGGCTCGGCACGAGCCTTGAAAAATCGGATCAGCTTCACCGCGTCGCGGAAAGCCTGTCGGTCATCGTCGAGCAGACGG
CTTCGGCCATTCAGGATATCGCCGAATCTGTCAGCGGCTTCTCCGGACAAATGTCCGACATCTCCAAGCAGGCGAAGGAA
GTCAGTGAAAGCGCCGGAGAAATCGAGAAAATTTCAGTCACCGTAAAAGGCATTTCAGATCAAAGCAACCTGCTCGGGCT
GAACGCGGCGATTGAAGCGGCGAGAGCCGGAGAGTCAGGAAAAGGGTTCTCCGTCGTCGCCGACGAAATCCGCAAGCTTG
CGACACACTCAAAAGAAAACGTCGGCCAGATTGACCAAATCACGAAGAAAATCCACGCGTTATTAAAAGACCTTGAGCAT
TCGATCGAAGTCATCAATGAACATACGAGCGGCCAGGCCGCAGGTGTTGAACAAATTTCCGCCACGATGCAGGAGATCAG
CAGCAACGCGCAAAACCTTGCCAAGATGGCGGAACACCAATTTGAAGACTAG

Upstream 100 bases:

>100_bases
CTGAACGGAGAGTGGAGCCTTGACGAATTTACGACATTAAAATGGATTTCCGTCCAGCACCAAAAAAGGAGTTTTCCATA
TTAAGAGGAGGATTTGATAC

Downstream 100 bases:

>100_bases
AACTTTCACAGGCCCGCTGGCAAAATCGGCGGGCTTTTCTAATTTTTCATTTATTAAAATTTTATTTTAAATTTTTTAGA
GGAATTTTCCCCGGTCAAAG

Product: YfmS

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNEAVKTDIHPLLDAFVKVAPFLNQLIQDDVTVGIYDTEKLIVNIPGKTFSLNVKAGDPLQEGDIITDAIRQNKKKVSMV
PKELFGFPLAARAIPLHDENGRVIGGVGLGTSLEKSDQLHRVAESLSVIVEQTASAIQDIAESVSGFSGQMSDISKQAKE
VSESAGEIEKISVTVKGISDQSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHALLKDLEH
SIEVINEHTSGQAAGVEQISATMQEISSNAQNLAKMAEHQFED

Sequences:

>Translated_283_residues
MNEAVKTDIHPLLDAFVKVAPFLNQLIQDDVTVGIYDTEKLIVNIPGKTFSLNVKAGDPLQEGDIITDAIRQNKKKVSMV
PKELFGFPLAARAIPLHDENGRVIGGVGLGTSLEKSDQLHRVAESLSVIVEQTASAIQDIAESVSGFSGQMSDISKQAKE
VSESAGEIEKISVTVKGISDQSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHALLKDLEH
SIEVINEHTSGQAAGVEQISATMQEISSNAQNLAKMAEHQFED
>Mature_283_residues
MNEAVKTDIHPLLDAFVKVAPFLNQLIQDDVTVGIYDTEKLIVNIPGKTFSLNVKAGDPLQEGDIITDAIRQNKKKVSMV
PKELFGFPLAARAIPLHDENGRVIGGVGLGTSLEKSDQLHRVAESLSVIVEQTASAIQDIAESVSGFSGQMSDISKQAKE
VSESAGEIEKISVTVKGISDQSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHALLKDLEH
SIEVINEHTSGQAAGVEQISATMQEISSNAQNLAKMAEHQFED

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=121, Percent_Identity=38.8429752066116, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788194, Length=150, Percent_Identity=32, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787690, Length=87, Percent_Identity=43.6781609195402, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789453, Length=171, Percent_Identity=30.4093567251462, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI2367378, Length=85, Percent_Identity=41.1764705882353, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 30314; Mature: 30314

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEAVKTDIHPLLDAFVKVAPFLNQLIQDDVTVGIYDTEKLIVNIPGKTFSLNVKAGDPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCEEEEEECCCCCC
QEGDIITDAIRQNKKKVSMVPKELFGFPLAARAIPLHDENGRVIGGVGLGTSLEKSDQLH
CCCCHHHHHHHCCHHHHHHCHHHHHCCCHHHCEECEECCCCCEEEECCCCCCCHHHHHHH
RVAESLSVIVEQTASAIQDIAESVSGFSGQMSDISKQAKEVSESAGEIEKISVTVKGISD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCC
QSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHALLKDLEH
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
SIEVINEHTSGQAAGVEQISATMQEISSNAQNLAKMAEHQFED
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNEAVKTDIHPLLDAFVKVAPFLNQLIQDDVTVGIYDTEKLIVNIPGKTFSLNVKAGDPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCEEEEEECCCCCC
QEGDIITDAIRQNKKKVSMVPKELFGFPLAARAIPLHDENGRVIGGVGLGTSLEKSDQLH
CCCCHHHHHHHCCHHHHHHCHHHHHCCCHHHCEECEECCCCCEEEECCCCCCCHHHHHHH
RVAESLSVIVEQTASAIQDIAESVSGFSGQMSDISKQAKEVSESAGEIEKISVTVKGISD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCC
QSNLLGLNAAIEAARAGESGKGFSVVADEIRKLATHSKENVGQIDQITKKIHALLKDLEH
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
SIEVINEHTSGQAAGVEQISATMQEISSNAQNLAKMAEHQFED
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]