Click here to switch to the map view.

The map label for this gene is 52784509

Identifier: 52784509

GI number: 52784509

Start: 713137

End: 713553

Strand: Direct

Name: 52784509

Synonym: BLi00709

Alternate gene names: NA

Gene position: 713137-713553 (Clockwise)

Preceding gene: 52784508

Following gene: 52784511

Centisome position: 16.89

GC content: 43.88

Gene sequence:

>417_bases
ATGTTGCCCAAGCACTCAAAAGATCAGCGTAAACAGCTTGAAGTCGTTGCCTTAAGTGAACTTGTCCCTGAAGATCAACT
GGTCAGGAAGATGGAAGAAGCCATGGATTTTTCATTTATTTATGAAAAAGTTGCCCCTCTTTATTCTTCAAAAGCACGTC
CAAGCATTGATCCCGTTGTATTGATCAAAATGGTTCTGATTCAATACGTGTTTGGGCATCGCTCCATGCGCGAAACCATC
GAACGGGTTTTTGCGGATTTAAAACACAAGCGTGGCCTGCGCTGGACAACCCTGCGGGGAAAGAAAAAATTGTCCATGCA
GGCGATGCTTGTTTTCGCTGCCATGAATCTAAAAAACTGGCGAATTGGACGTGGAAAGGCCCTAATCGCCAGCCTTTTCA
TCGAAAAAACAAAATAA

Upstream 100 bases:

>100_bases
AAAAGCATCCCGGTTTGGGATGTTTCGGCTTGTCGACAAAGTCATAAAAAGTGGCTTCATCGACAAGCTTTTTTAAAAAA
ATGTGAGTGGAATCTAGATT

Downstream 100 bases:

>100_bases
ACTGGACAAAAATAGGTCGGATCTTAGAAATCCGACCTATTTTGTCAACGGTCTGAAAGCACCTATAAAAGGTGCTTTTT
ATGATTGTTCGCCAGTCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: ISBma2 Transposase; Transposase IS4 Family Protein; Transposase-Related Protein; Phage-Associated Cell Wall Hydrolase; IS4 Transposase; Transposase For IS; ISSag8 Transposase

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLPKHSKDQRKQLEVVALSELVPEDQLVRKMEEAMDFSFIYEKVAPLYSSKARPSIDPVVLIKMVLIQYVFGHRSMRETI
ERVFADLKHKRGLRWTTLRGKKKLSMQAMLVFAAMNLKNWRIGRGKALIASLFIEKTK

Sequences:

>Translated_138_residues
MLPKHSKDQRKQLEVVALSELVPEDQLVRKMEEAMDFSFIYEKVAPLYSSKARPSIDPVVLIKMVLIQYVFGHRSMRETI
ERVFADLKHKRGLRWTTLRGKKKLSMQAMLVFAAMNLKNWRIGRGKALIASLFIEKTK
>Mature_138_residues
MLPKHSKDQRKQLEVVALSELVPEDQLVRKMEEAMDFSFIYEKVAPLYSSKARPSIDPVVLIKMVLIQYVFGHRSMRETI
ERVFADLKHKRGLRWTTLRGKKKLSMQAMLVFAAMNLKNWRIGRGKALIASLFIEKTK

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16076; Mature: 16076

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPKHSKDQRKQLEVVALSELVPEDQLVRKMEEAMDFSFIYEKVAPLYSSKARPSIDPVV
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LIKMVLIQYVFGHRSMRETIERVFADLKHKRGLRWTTLRGKKKLSMQAMLVFAAMNLKNW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCC
RIGRGKALIASLFIEKTK
CCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPKHSKDQRKQLEVVALSELVPEDQLVRKMEEAMDFSFIYEKVAPLYSSKARPSIDPVV
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LIKMVLIQYVFGHRSMRETIERVFADLKHKRGLRWTTLRGKKKLSMQAMLVFAAMNLKNW
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCC
RIGRGKALIASLFIEKTK
CCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA