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The map label for this gene is ydiD [H]

Identifier: 52784420

GI number: 52784420

Start: 619253

End: 619711

Strand: Direct

Name: ydiD [H]

Synonym: BLi00614

Alternate gene names: 52784420

Gene position: 619253-619711 (Clockwise)

Preceding gene: 52784419

Following gene: 52784421

Centisome position: 14.67

GC content: 43.36

Gene sequence:

>459_bases
ATGAACACGCAAATGGTCATACGCGATATGAATCCAAAGGATTTGGACCAGGTTTTTGAAATTGAAAAAAGCTCTTTTTC
TTCTCCGTGGAAAAAAGAATCTTTTCATCATGAGCTTTTTCACAATATGTATGCTCATTATCTCGTTCTCGAAGTTGAGG
AGCAAGTCGTCGGCTACTGCGGGATTTGGATCGTAATGGATGACGCCCAGATCACCAATATTGCCGTTTCACCTGCATAC
CGGGGCCGCCGCTTCGGTGAAGCTCTTTTGAAGGCGGCCATGAAGCTTTGCCGGATGAAAAGGGCGGTTCAGCTTTCTTT
AGAGGTGAGGGTATCGAATCATATTGCACAGAGCTTATACAAAAAGCTCGGCTTTGAGCCGGGAGGAATTCGCAAAAATT
ATTATACCGATAATGGGGAAGATGCATTATTAATGTGGGTGAGACTAAATGAATCATAA

Upstream 100 bases:

>100_bases
TAAAGAGGACGAGCCAGTGCACAGCATTGTTCCAAACTATATTCGTCTGGCCGAAGCCGAGGCCGTCTGGCTTGAAAAAC
AAAAGTAAACGGGTGAAGCC

Downstream 100 bases:

>100_bases
AAAAGATCTGTATGTATTAGGAATCGAAACAAGCTGTGATGAGACTGCCGCTGCGATTGTCAAAAACGGGACGGACATCA
TCTCAAATGTCGTAGCGTCG

Product: YdiD

Products: NA

Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNTQMVIRDMNPKDLDQVFEIEKSSFSSPWKKESFHHELFHNMYAHYLVLEVEEQVVGYCGIWIVMDDAQITNIAVSPAY
RGRRFGEALLKAAMKLCRMKRAVQLSLEVRVSNHIAQSLYKKLGFEPGGIRKNYYTDNGEDALLMWVRLNES

Sequences:

>Translated_152_residues
MNTQMVIRDMNPKDLDQVFEIEKSSFSSPWKKESFHHELFHNMYAHYLVLEVEEQVVGYCGIWIVMDDAQITNIAVSPAY
RGRRFGEALLKAAMKLCRMKRAVQLSLEVRVSNHIAQSLYKKLGFEPGGIRKNYYTDNGEDALLMWVRLNES
>Mature_152_residues
MNTQMVIRDMNPKDLDQVFEIEKSSFSSPWKKESFHHELFHNMYAHYLVLEVEEQVVGYCGIWIVMDDAQITNIAVSPAY
RGRRFGEALLKAAMKLCRMKRAVQLSLEVRVSNHIAQSLYKKLGFEPGGIRKNYYTDNGEDALLMWVRLNES

Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 (Potential) [H]

COG id: COG0456

COG function: function code R; Acetyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI2367381, Length=149, Percent_Identity=34.2281879194631, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006464 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: =2.3.1.128 [H]

Molecular weight: Translated: 17677; Mature: 17677

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQMVIRDMNPKDLDQVFEIEKSSFSSPWKKESFHHELFHNMYAHYLVLEVEEQVVGYC
CCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEHHHHHCEE
GIWIVMDDAQITNIAVSPAYRGRRFGEALLKAAMKLCRMKRAVQLSLEVRVSNHIAQSLY
EEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHH
KKLGFEPGGIRKNYYTDNGEDALLMWVRLNES
HHHCCCCCCCCCCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MNTQMVIRDMNPKDLDQVFEIEKSSFSSPWKKESFHHELFHNMYAHYLVLEVEEQVVGYC
CCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEHHHHHCEE
GIWIVMDDAQITNIAVSPAYRGRRFGEALLKAAMKLCRMKRAVQLSLEVRVSNHIAQSLY
EEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHH
KKLGFEPGGIRKNYYTDNGEDALLMWVRLNES
HHHCCCCCCCCCCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]