| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is yhdG [H]
Identifier: 52784295
GI number: 52784295
Start: 477659
End: 479050
Strand: Direct
Name: yhdG [H]
Synonym: BLi00475
Alternate gene names: 52784295
Gene position: 477659-479050 (Clockwise)
Preceding gene: 52784294
Following gene: 52784296
Centisome position: 11.31
GC content: 50.36
Gene sequence:
>1392_bases ATGGGTAAACAGCAAATGAAAAAAACGATGTCGCAGACGGATGTGCTATTTTTAGCGATCGGAGCTATGCTCGGCTGGGG CTGGGTCGTCCTTTCCGGCGACTGGATTTCGACAGCCGGCTTTTTGGGCAGCACGATCGCGTTTATCATCGGCGGCATAC TCGTCATCTTAATCGGGTTAACGTACGCGGAGCTGTCTTCTGCCATCCCTGAAACGGGTGGCGGCTTGATTTTCGTCTAC AGGGCGTTCGGACGAAAAACGGCTTTTGTCGCCGCTTGGGGTGTGCTGTTCGGCTATGTTTCGGTGATTACATTTGAGGC GGTCGCATTGCCTACCGTCATCGATTACGTCCTGCCTGTCGAACATCAGGGGTTTCTCTGGTCGCTAAGCGGCTGGGACG TGTATGTCACTTGGGTGTTGATCGGTTCGGGAGGTGCGGTCGTCCTGACAGCGCTCAATTACTTCGGCGTCAAGCCGGCC GCGATTTTTCAGTCGGTCTTTACGATTGCGATTATCGCCACGGGCTTTCTCCTTTTGGGCGGCGCCTTGGTAAACGGTGA TTTCGAACATGTACAGCCCCTTTTTAAAGACGGGTTTTCCGGTATGATGTCCGTCCTTGTCATGATTCCGTTTCTATTTG TCGGATTTGACGTCATCCCTCAGGTTGCGGCTGAAATTAATGCCCCGAAAAAAATCATCGGCAAAATTTTGATTATTTCG ATTATCAGTGCGGTCGTGTTTTATTTGCTGATTGTATTCGGCGTAACGATGGGTCTGTCAGAAAGCGAGCTTGCGACGAC TTCTTTGGCAACCGCGGATGCAATGGTCAATCTGCTCGGGAACCAGCTGTTCGGCACGGTGCTTGTCCTCGGCGGCGTCG CCGGAATCATTACGAGCTGGAACGCATTTATCATCGGCGCGAGCCGGATTCTGTTTGCAATGTCGGAAAAGGGCATGGTG CCGAAATGGTTCGGCTTCATCCATCCGAAGTATAAAACGCCGACTAATGCAATTTTATTTCTGGGTGCGCTGGCGTTTTT TGCCCCGCTGCTCGGACGCCCTGCCCTTGTTTGGATCGTCAATGCAGGGGGAACAGGTATTATAGTCGGATATTTGATCG TCTCGATTGCATTCATGAAGCTGAGAAAAACAGAGCCGGATTTACACAGGCCGTATAAAATCAATAAGTGGAAAACAACG GGTATATCTGCTATCCTCTTAAGTGTTATCTTCCTTGCCTTTTATTTGCCAGGCATGCCGGCCGCGCTCACATGGCCGTA TGAGTGGCTGATCTTGGCGGGATGGACATTGATCGGTTTTCTTTTATACAACAGCAGTTCAAAACGTAAAGGGGAGGAGA TTCAACATGACCAGCATGCTAGAAGTATATAA
Upstream 100 bases:
>100_bases CGTCATTACTGATGAATTACTTGAGGAAGGGTTCGGCATCATTGAAGAAGCGCTGGAACAGCTCTAGTTTGACATCTTCT AAAAGAAGGAGCGGATTTTG
Downstream 100 bases:
>100_bases TCCTGCGACTGGAGAAAAAATCAAATCGGTTCCCCAGCAATCCGCAAAGGAAGTCGAAGAAGCTGTCGTACGCTCGCATG AGGCATTTCAAAAATGGTCG
Product: YhdG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MGKQQMKKTMSQTDVLFLAIGAMLGWGWVVLSGDWISTAGFLGSTIAFIIGGILVILIGLTYAELSSAIPETGGGLIFVY RAFGRKTAFVAAWGVLFGYVSVITFEAVALPTVIDYVLPVEHQGFLWSLSGWDVYVTWVLIGSGGAVVLTALNYFGVKPA AIFQSVFTIAIIATGFLLLGGALVNGDFEHVQPLFKDGFSGMMSVLVMIPFLFVGFDVIPQVAAEINAPKKIIGKILIIS IISAVVFYLLIVFGVTMGLSESELATTSLATADAMVNLLGNQLFGTVLVLGGVAGIITSWNAFIIGASRILFAMSEKGMV PKWFGFIHPKYKTPTNAILFLGALAFFAPLLGRPALVWIVNAGGTGIIVGYLIVSIAFMKLRKTEPDLHRPYKINKWKTT GISAILLSVIFLAFYLPGMPAALTWPYEWLILAGWTLIGFLLYNSSSKRKGEEIQHDQHARSI
Sequences:
>Translated_463_residues MGKQQMKKTMSQTDVLFLAIGAMLGWGWVVLSGDWISTAGFLGSTIAFIIGGILVILIGLTYAELSSAIPETGGGLIFVY RAFGRKTAFVAAWGVLFGYVSVITFEAVALPTVIDYVLPVEHQGFLWSLSGWDVYVTWVLIGSGGAVVLTALNYFGVKPA AIFQSVFTIAIIATGFLLLGGALVNGDFEHVQPLFKDGFSGMMSVLVMIPFLFVGFDVIPQVAAEINAPKKIIGKILIIS IISAVVFYLLIVFGVTMGLSESELATTSLATADAMVNLLGNQLFGTVLVLGGVAGIITSWNAFIIGASRILFAMSEKGMV PKWFGFIHPKYKTPTNAILFLGALAFFAPLLGRPALVWIVNAGGTGIIVGYLIVSIAFMKLRKTEPDLHRPYKINKWKTT GISAILLSVIFLAFYLPGMPAALTWPYEWLILAGWTLIGFLLYNSSSKRKGEEIQHDQHARSI >Mature_462_residues GKQQMKKTMSQTDVLFLAIGAMLGWGWVVLSGDWISTAGFLGSTIAFIIGGILVILIGLTYAELSSAIPETGGGLIFVYR AFGRKTAFVAAWGVLFGYVSVITFEAVALPTVIDYVLPVEHQGFLWSLSGWDVYVTWVLIGSGGAVVLTALNYFGVKPAA IFQSVFTIAIIATGFLLLGGALVNGDFEHVQPLFKDGFSGMMSVLVMIPFLFVGFDVIPQVAAEINAPKKIIGKILIISI ISAVVFYLLIVFGVTMGLSESELATTSLATADAMVNLLGNQLFGTVLVLGGVAGIITSWNAFIIGASRILFAMSEKGMVP KWFGFIHPKYKTPTNAILFLGALAFFAPLLGRPALVWIVNAGGTGIIVGYLIVSIAFMKLRKTEPDLHRPYKINKWKTTG ISAILLSVIFLAFYLPGMPAALTWPYEWLILAGWTLIGFLLYNSSSKRKGEEIQHDQHARSI
Specific function: Unknown
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI114326544, Length=422, Percent_Identity=24.1706161137441, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI114326550, Length=422, Percent_Identity=24.1706161137441, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI258614003, Length=423, Percent_Identity=24.113475177305, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI186910308, Length=412, Percent_Identity=26.6990291262136, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI186910306, Length=412, Percent_Identity=26.6990291262136, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI186910304, Length=412, Percent_Identity=26.6990291262136, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI258614005, Length=423, Percent_Identity=24.113475177305, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI115648063, Length=362, Percent_Identity=27.0718232044199, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI115648022, Length=362, Percent_Identity=27.0718232044199, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI4507047, Length=420, Percent_Identity=23.8095238095238, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI258645169, Length=424, Percent_Identity=23.5849056603774, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI110347453, Length=353, Percent_Identity=24.6458923512748, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI181337167, Length=404, Percent_Identity=22.7722772277228, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI7657683, Length=378, Percent_Identity=23.8095238095238, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI33286428, Length=431, Percent_Identity=23.8979118329466, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI87082250, Length=357, Percent_Identity=25.2100840336134, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789017, Length=398, Percent_Identity=24.8743718592965, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1786302, Length=474, Percent_Identity=24.2616033755274, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788480, Length=406, Percent_Identity=21.1822660098522, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87081708, Length=361, Percent_Identity=23.2686980609418, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87082023, Length=367, Percent_Identity=22.0708446866485, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17540018, Length=410, Percent_Identity=26.3414634146341, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17533459, Length=410, Percent_Identity=25.1219512195122, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17531343, Length=400, Percent_Identity=22.75, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17532491, Length=433, Percent_Identity=22.4018475750577, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI32566699, Length=310, Percent_Identity=24.5161290322581, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324061, Length=491, Percent_Identity=21.9959266802444, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324553, Length=468, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24666159, Length=429, Percent_Identity=24.9417249417249, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI221512776, Length=429, Percent_Identity=24.9417249417249, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24668806, Length=416, Percent_Identity=24.2788461538462, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI21356285, Length=416, Percent_Identity=24.2788461538462, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24668802, Length=416, Percent_Identity=24.2788461538462, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24667468, Length=411, Percent_Identity=24.330900243309, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI221331183, Length=411, Percent_Identity=23.3576642335766, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI17647653, Length=411, Percent_Identity=23.3576642335766, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24664379, Length=411, Percent_Identity=23.3576642335766, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI281366235, Length=412, Percent_Identity=24.0291262135922, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI116007820, Length=412, Percent_Identity=24.0291262135922, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357367, Length=423, Percent_Identity=23.4042553191489, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI45550968, Length=485, Percent_Identity=23.2989690721649, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI19921172, Length=485, Percent_Identity=23.2989690721649, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI116007818, Length=409, Percent_Identity=24.2053789731051, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI85725152, Length=409, Percent_Identity=24.2053789731051, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI161077963, Length=397, Percent_Identity=23.4256926952141, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004758 - InterPro: IPR015606 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 49983; Mature: 49852
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKQQMKKTMSQTDVLFLAIGAMLGWGWVVLSGDWISTAGFLGSTIAFIIGGILVILIGL CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH TYAELSSAIPETGGGLIFVYRAFGRKTAFVAAWGVLFGYVSVITFEAVALPTVIDYVLPV HHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EHQGFLWSLSGWDVYVTWVLIGSGGAVVLTALNYFGVKPAAIFQSVFTIAIIATGFLLLG CCCCEEEEECCCEEEEEEEEEECCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GALVNGDFEHVQPLFKDGFSGMMSVLVMIPFLFVGFDVIPQVAAEINAPKKIIGKILIIS CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IISAVVFYLLIVFGVTMGLSESELATTSLATADAMVNLLGNQLFGTVLVLGGVAGIITSW HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NAFIIGASRILFAMSEKGMVPKWFGFIHPKYKTPTNAILFLGALAFFAPLLGRPALVWIV CHHEEEHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE NAGGTGIIVGYLIVSIAFMKLRKTEPDLHRPYKINKWKTTGISAILLSVIFLAFYLPGMP ECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCC AALTWPYEWLILAGWTLIGFLLYNSSSKRKGEEIQHDQHARSI CEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure GKQQMKKTMSQTDVLFLAIGAMLGWGWVVLSGDWISTAGFLGSTIAFIIGGILVILIGL CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH TYAELSSAIPETGGGLIFVYRAFGRKTAFVAAWGVLFGYVSVITFEAVALPTVIDYVLPV HHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EHQGFLWSLSGWDVYVTWVLIGSGGAVVLTALNYFGVKPAAIFQSVFTIAIIATGFLLLG CCCCEEEEECCCEEEEEEEEEECCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GALVNGDFEHVQPLFKDGFSGMMSVLVMIPFLFVGFDVIPQVAAEINAPKKIIGKILIIS CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IISAVVFYLLIVFGVTMGLSESELATTSLATADAMVNLLGNQLFGTVLVLGGVAGIITSW HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NAFIIGASRILFAMSEKGMVPKWFGFIHPKYKTPTNAILFLGALAFFAPLLGRPALVWIV CHHEEEHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE NAGGTGIIVGYLIVSIAFMKLRKTEPDLHRPYKINKWKTTGISAILLSVIFLAFYLPGMP ECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCC AALTWPYEWLILAGWTLIGFLLYNSSSKRKGEEIQHDQHARSI CEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]