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The map label for this gene is chvE [H]

Identifier: 52784262

GI number: 52784262

Start: 439311

End: 440390

Strand: Direct

Name: chvE [H]

Synonym: BLi00442

Alternate gene names: 52784262

Gene position: 439311-440390 (Clockwise)

Preceding gene: 52784261

Following gene: 52784263

Centisome position: 10.4

GC content: 46.94

Gene sequence:

>1080_bases
ATGAAAAAATGCTGGCTGTTGATCACTGCAATGCTTTTCTGTCTCATCGTTACCGCTTGTTCGGGGAATCAGGCAAGCGG
AGGGGGAGACAAAGGCTACGTCGGAATCTCAATGCCGACAAAGTCATCGGAACGCTGGGTGTATGACGGGAAATACATGG
TGAAAGAGTTTGAAAAGCTCGGTTATAAAACGGATCTGCAGTATGCGGAAGATGTCGTTGAAAACCAAGTTTCACAAATC
GAAAATATGATTACAAAGGGCGTCAATGTGCTTGTCATTGCTTCGATTGACGGAGAAGCGCTGACCGACGTCCTAGAGAA
AGCAAACAAGCAGGATATTAAAGTCATTTCTTATGACCGGCTGCTCATGAACAGCAAACATGTCGACTATTATGCGACAT
TTGACAATCATAAAGTCGGGGAACTTCAAGGGAAATATATTGAAGAAAAGCTTGGCTTAAAAGACAAAAAAGGGCCGTTC
AACATCGAATTGTTCGCGGGATCGCCCGACGACAACAACGCGCATTTCTTTTTTGACGGCGCCATGTCTGTTTTGAAGCC
TTATATCGATTCGGGCAAATTAAAGGTGTTGAGCGGCCAGACTTCATTTGAGCAAGGGGCGACGCTCAGGTGGGACGGCG
CAACCGCACAATCCCGGATGGACAATTTGCTGAGTGCGCATTATACAAAGGCGAAGCTTGATGCGGTGCTTTCACCGTAT
GACGGAATCAGCATCGGAATCATTTCATCCTTAAAAGGTGCGGGCTACGGCTCGGACAAGAAGCCGCTGCCGGTTATTAC
GGGACAGGATGCAGAGCTTGCTTCCGTGAATTCGATCATTAAAGGGGAGCAGACCTCAACCATTTTCAAAGATACGAGAG
AGCTGGCGAAAAAAGCCGTTGAGATGGCGTCATCCGTCTTAAAAGGCGAAAAAGCGGAAGTCAATGACACAAAGACGTAT
GACAACGGAGAGAAGGTCGTTCCATCATACCTGCTTGAACCGGTCGTCGTCGACAAAGAGAACTACAAAAAAGTGCTCGT
TGACGGCGGTTACTATAAAGAATCGGAATTAGGGAAGTGA

Upstream 100 bases:

>100_bases
TTATAAAAATAGTTAATTAATTCAAAAGACGGACATTCGAAAGACATGGTACAGTTGGCATGATTCATGATGGGAGAAAT
CAAAAAGGGGGATACCAAGC

Downstream 100 bases:

>100_bases
TCCGATGTCCGATTGCATTTTAGAGATGAGAGGCATCACGAAGGAGTTTCCCGGCGTCAAAGCGCTCGACAATGTCCACC
TTCGCGTTAAAGCGGGCGAA

Product: hypothetical protein

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKKCWLLITAMLFCLIVTACSGNQASGGGDKGYVGISMPTKSSERWVYDGKYMVKEFEKLGYKTDLQYAEDVVENQVSQI
ENMITKGVNVLVIASIDGEALTDVLEKANKQDIKVISYDRLLMNSKHVDYYATFDNHKVGELQGKYIEEKLGLKDKKGPF
NIELFAGSPDDNNAHFFFDGAMSVLKPYIDSGKLKVLSGQTSFEQGATLRWDGATAQSRMDNLLSAHYTKAKLDAVLSPY
DGISIGIISSLKGAGYGSDKKPLPVITGQDAELASVNSIIKGEQTSTIFKDTRELAKKAVEMASSVLKGEKAEVNDTKTY
DNGEKVVPSYLLEPVVVDKENYKKVLVDGGYYKESELGK

Sequences:

>Translated_359_residues
MKKCWLLITAMLFCLIVTACSGNQASGGGDKGYVGISMPTKSSERWVYDGKYMVKEFEKLGYKTDLQYAEDVVENQVSQI
ENMITKGVNVLVIASIDGEALTDVLEKANKQDIKVISYDRLLMNSKHVDYYATFDNHKVGELQGKYIEEKLGLKDKKGPF
NIELFAGSPDDNNAHFFFDGAMSVLKPYIDSGKLKVLSGQTSFEQGATLRWDGATAQSRMDNLLSAHYTKAKLDAVLSPY
DGISIGIISSLKGAGYGSDKKPLPVITGQDAELASVNSIIKGEQTSTIFKDTRELAKKAVEMASSVLKGEKAEVNDTKTY
DNGEKVVPSYLLEPVVVDKENYKKVLVDGGYYKESELGK
>Mature_359_residues
MKKCWLLITAMLFCLIVTACSGNQASGGGDKGYVGISMPTKSSERWVYDGKYMVKEFEKLGYKTDLQYAEDVVENQVSQI
ENMITKGVNVLVIASIDGEALTDVLEKANKQDIKVISYDRLLMNSKHVDYYATFDNHKVGELQGKYIEEKLGLKDKKGPF
NIELFAGSPDDNNAHFFFDGAMSVLKPYIDSGKLKVLSGQTSFEQGATLRWDGATAQSRMDNLLSAHYTKAKLDAVLSPY
DGISIGIISSLKGAGYGSDKKPLPVITGQDAELASVNSIIKGEQTSTIFKDTRELAKKAVEMASSVLKGEKAEVNDTKTY
DNGEKVVPSYLLEPVVVDKENYKKVLVDGGYYKESELGK

Specific function: Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Function as a periplasmic multiple sugar-binding receptor protein. It does not i

COG id: COG4213

COG function: function code G; ABC-type xylose transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789990, Length=324, Percent_Identity=41.358024691358, Blast_Score=208, Evalue=5e-55,
Organism=Escherichia coli, GI1790192, Length=315, Percent_Identity=25.3968253968254, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788473, Length=275, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 39466; Mature: 39466

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKCWLLITAMLFCLIVTACSGNQASGGGDKGYVGISMPTKSSERWVYDGKYMVKEFEKL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEECCHHHHHHHHHC
GYKTDLQYAEDVVENQVSQIENMITKGVNVLVIASIDGEALTDVLEKANKQDIKVISYDR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEHHH
LLMNSKHVDYYATFDNHKVGELQGKYIEEKLGLKDKKGPFNIELFAGSPDDNNAHFFFDG
HHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEECC
AMSVLKPYIDSGKLKVLSGQTSFEQGATLRWDGATAQSRMDNLLSAHYTKAKLDAVLSPY
HHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
DGISIGIISSLKGAGYGSDKKPLPVITGQDAELASVNSIIKGEQTSTIFKDTRELAKKAV
CCCEEHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EMASSVLKGEKAEVNDTKTYDNGEKVVPSYLLEPVVVDKENYKKVLVDGGYYKESELGK
HHHHHHHCCCCCCCCCCCCCCCCCHHCHHHHCCCEEECCCCCEEEEECCCEECHHCCCC
>Mature Secondary Structure
MKKCWLLITAMLFCLIVTACSGNQASGGGDKGYVGISMPTKSSERWVYDGKYMVKEFEKL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEECCHHHHHHHHHC
GYKTDLQYAEDVVENQVSQIENMITKGVNVLVIASIDGEALTDVLEKANKQDIKVISYDR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEHHH
LLMNSKHVDYYATFDNHKVGELQGKYIEEKLGLKDKKGPFNIELFAGSPDDNNAHFFFDG
HHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEECC
AMSVLKPYIDSGKLKVLSGQTSFEQGATLRWDGATAQSRMDNLLSAHYTKAKLDAVLSPY
HHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
DGISIGIISSLKGAGYGSDKKPLPVITGQDAELASVNSIIKGEQTSTIFKDTRELAKKAV
CCCEEHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EMASSVLKGEKAEVNDTKTYDNGEKVVPSYLLEPVVVDKENYKKVLVDGGYYKESELGK
HHHHHHHCCCCCCCCCCCCCCCCCHHCHHHHCCCEEECCCCCEEEEECCCEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253785; 2156804; 11743193; 11743194 [H]